(7 nodes) Gamma-catenin binding network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014365	HMG box domain-containing protein. (330 aa)
	ASZ78_006232	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (701 aa)
	ASZ78_006754	Uncharacterized protein. (2543 aa)
	ASZ78_015528	Uncharacterized protein. (2735 aa)
	ASZ78_015964	Uncharacterized protein. (1050 aa)
	ASZ78_008349	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (666 aa)
	ASZ78_006233	Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (123 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_006232	ASZ78_006233	A0A226NCL9	A0A226NCJ7	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins.	0.513
ASZ78_006233	ASZ78_006232	A0A226NCJ7	A0A226NCL9	Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.513
ASZ78_006754	ASZ78_014365	A0A226MHF4	A0A226NLH1	Uncharacterized protein.	HMG box domain-containing protein.	0.769
ASZ78_014365	ASZ78_006754	A0A226NLH1	A0A226MHF4	HMG box domain-containing protein.	Uncharacterized protein.	0.769
ASZ78_014365	ASZ78_015528	A0A226NLH1	A0A226MIQ3	HMG box domain-containing protein.	Uncharacterized protein.	0.769
ASZ78_015528	ASZ78_014365	A0A226MIQ3	A0A226NLH1	Uncharacterized protein.	HMG box domain-containing protein.	0.769