16 items (Callipepla squamata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
	ASZ78_002193	SHMT domain-containing protein. (414 aa)
	ASZ78_001576	RRM domain-containing protein. (478 aa)
	ASZ78_004944	Uncharacterized protein. (479 aa)
	ASZ78_016347	Uncharacterized protein. (496 aa)
	ASZ78_000379	Uncharacterized protein. (707 aa)
	ASZ78_006810	Uncharacterized protein. (246 aa)
	ASZ78_011535	CP-type G domain-containing protein. (535 aa)
	ASZ78_004808	Uncharacterized protein. (115 aa)
	ASZ78_003906	Ribosomal_L18_c domain-containing protein. (308 aa)
	ASZ78_009297	Uncharacterized protein. (446 aa)
	ASZ78_009110	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (126 aa)
	ASZ78_003839	HTH La-type RNA-binding domain-containing protein. (432 aa)
	ASZ78_003571	HTH La-type RNA-binding domain-containing protein. (1105 aa)
	ASZ78_011844	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ASZ78_004849	HTH La-type RNA-binding domain-containing protein. (473 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000379	ASZ78_004808	A0A226N6I9	A0A226MWR2	Uncharacterized protein.	Uncharacterized protein.	0.548
ASZ78_000379	ASZ78_009110	A0A226N6I9	A0A226MQC9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.545
ASZ78_000379	ASZ78_011844	A0A226N6I9	A0A226MIL7	Uncharacterized protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.423
ASZ78_000379	RPS3A	A0A226N6I9	A0A226MV60	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.558
ASZ78_003906	ASZ78_004808	A0A226MS06	A0A226MWR2	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.996
ASZ78_003906	ASZ78_004944	A0A226MS06	A0A226NCG3	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.419
ASZ78_003906	ASZ78_009110	A0A226MS06	A0A226MQC9	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.976
ASZ78_003906	ASZ78_009297	A0A226MS06	A0A226MRB3	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.936
ASZ78_003906	ASZ78_011535	A0A226MS06	A0A226MZC6	Ribosomal_L18_c domain-containing protein.	CP-type G domain-containing protein.	0.845
ASZ78_003906	ASZ78_011844	A0A226MS06	A0A226MIL7	Ribosomal_L18_c domain-containing protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
ASZ78_003906	ASZ78_016347	A0A226MS06	A0A226N6R9	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.428
ASZ78_003906	RPS3A	A0A226MS06	A0A226MV60	Ribosomal_L18_c domain-containing protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
ASZ78_004808	ASZ78_000379	A0A226MWR2	A0A226N6I9	Uncharacterized protein.	Uncharacterized protein.	0.548
ASZ78_004808	ASZ78_003906	A0A226MWR2	A0A226MS06	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.996
ASZ78_004808	ASZ78_006810	A0A226MWR2	A0A226N5N0	Uncharacterized protein.	Uncharacterized protein.	0.497
ASZ78_004808	ASZ78_009297	A0A226MWR2	A0A226MRB3	Uncharacterized protein.	Uncharacterized protein.	0.802
ASZ78_004808	ASZ78_011844	A0A226MWR2	A0A226MIL7	Uncharacterized protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
ASZ78_004808	RPS3A	A0A226MWR2	A0A226MV60	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
ASZ78_004944	ASZ78_003906	A0A226NCG3	A0A226MS06	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.419
ASZ78_004944	ASZ78_011844	A0A226NCG3	A0A226MIL7	Uncharacterized protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.410