(43 nodes) Synaptic vesicle endocytosis network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_001899	Uncharacterized protein. (1108 aa)
	ASZ78_003827	Alpha-synuclein; Belongs to the synuclein family. (231 aa)
	ASZ78_006196	COesterase domain-containing protein. (868 aa)
	ASZ78_003476	BAR domain-containing protein. (128 aa)
	ASZ78_003483	SH3 domain-containing protein. (942 aa)
	ASZ78_003477	BAR domain-containing protein. (88 aa)
	ASZ78_005137	Uncharacterized protein. (1548 aa)
	ASZ78_013757	Uncharacterized protein. (110 aa)
	ASZ78_013759	Uncharacterized protein. (914 aa)
	ASZ78_013761	FSA_C domain-containing protein. (786 aa)
	ASZ78_013762	Uncharacterized protein. (722 aa)
	ASZ78_013765	Uncharacterized protein. (322 aa)
	ASZ78_013763	FSA_C domain-containing protein. (284 aa)
	ASZ78_012670	ENTH domain-containing protein. (626 aa)
	ASZ78_003900	BTB domain-containing protein. (1534 aa)
	ASZ78_011805	GED domain-containing protein. (211 aa)
	ASZ78_011807	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (411 aa)
	ASZ78_011810	PH domain-containing protein. (164 aa)
	ASZ78_014476	Uncharacterized protein; Belongs to the Stoned B family. (732 aa)
	ASZ78_003786	ENTH domain-containing protein. (571 aa)
	ASZ78_000249	Beta-synuclein; Belongs to the synuclein family. (120 aa)
	ASZ78_006321	Uncharacterized protein. (416 aa)
	ASZ78_016242	Uncharacterized protein. (494 aa)
	ASZ78_010873	COesterase domain-containing protein. (851 aa)
	ASZ78_013270	Uncharacterized protein. (308 aa)
	ASZ78_003694	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (224 aa)
	ASZ78_008179	COesterase domain-containing protein. (598 aa)
	ASZ78_011511	Stonin2_N domain-containing protein. (119 aa)
	ASZ78_011512	Uncharacterized protein; Belongs to the Stoned B family. (694 aa)
	ASZ78_016071	Uncharacterized protein. (354 aa)
	ASZ78_010835	Uncharacterized protein. (1287 aa)
	ASZ78_013892	Uncharacterized protein. (638 aa)
	ASZ78_013893	Uncharacterized protein. (251 aa)
	ASZ78_005648	Uncharacterized protein. (556 aa)
	ASZ78_015906	Uncharacterized protein. (415 aa)
	ASZ78_016778	Uncharacterized protein. (349 aa)
	ASZ78_009614	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1004 aa)
	ASZ78_016727	ENTH domain-containing protein. (625 aa)
	ASZ78_003331	Gamma-synuclein; Belongs to the synuclein family. (133 aa)
	ASZ78_014299	Uncharacterized protein. (2221 aa)
	ASZ78_012851	Uncharacterized protein. (80 aa)
	ASZ78_014286	Uncharacterized protein. (1681 aa)
	ASZ78_012852	C2 domain-containing protein. (382 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000249	ASZ78_003331	A0A226N1H5	A0A226NL37	Beta-synuclein; Belongs to the synuclein family.	Gamma-synuclein; Belongs to the synuclein family.	0.626
ASZ78_000249	ASZ78_003827	A0A226N1H5	A0A226MFC2	Beta-synuclein; Belongs to the synuclein family.	Alpha-synuclein; Belongs to the synuclein family.	0.551
ASZ78_003331	ASZ78_000249	A0A226NL37	A0A226N1H5	Gamma-synuclein; Belongs to the synuclein family.	Beta-synuclein; Belongs to the synuclein family.	0.626
ASZ78_003476	ASZ78_003477	A0A226MH76	A0A226MH85	BAR domain-containing protein.	BAR domain-containing protein.	0.461
ASZ78_003476	ASZ78_003483	A0A226MH76	A0A226MH83	BAR domain-containing protein.	SH3 domain-containing protein.	0.515
ASZ78_003476	ASZ78_005137	A0A226MH76	A0A226MK60	BAR domain-containing protein.	Uncharacterized protein.	0.560
ASZ78_003476	ASZ78_009614	A0A226MH76	A0A226NNZ0	BAR domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.752
ASZ78_003476	ASZ78_010835	A0A226MH76	A0A226NG43	BAR domain-containing protein.	Uncharacterized protein.	0.449
ASZ78_003476	ASZ78_011805	A0A226MH76	A0A226MRP7	BAR domain-containing protein.	GED domain-containing protein.	0.752
ASZ78_003476	ASZ78_011807	A0A226MH76	A0A226MRT3	BAR domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.752
ASZ78_003476	ASZ78_011810	A0A226MH76	A0A226MS85	BAR domain-containing protein.	PH domain-containing protein.	0.752
ASZ78_003476	ASZ78_014286	A0A226MH76	A0A226NNA6	BAR domain-containing protein.	Uncharacterized protein.	0.488
ASZ78_003476	ASZ78_014299	A0A226MH76	A0A226NMJ7	BAR domain-containing protein.	Uncharacterized protein.	0.607
ASZ78_003476	ASZ78_016778	A0A226MH76	A0A226NIW6	BAR domain-containing protein.	Uncharacterized protein.	0.470
ASZ78_003477	ASZ78_003476	A0A226MH85	A0A226MH76	BAR domain-containing protein.	BAR domain-containing protein.	0.461
ASZ78_003477	ASZ78_003483	A0A226MH85	A0A226MH83	BAR domain-containing protein.	SH3 domain-containing protein.	0.478
ASZ78_003477	ASZ78_005137	A0A226MH85	A0A226MK60	BAR domain-containing protein.	Uncharacterized protein.	0.560
ASZ78_003477	ASZ78_009614	A0A226MH85	A0A226NNZ0	BAR domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.752
ASZ78_003477	ASZ78_010835	A0A226MH85	A0A226NG43	BAR domain-containing protein.	Uncharacterized protein.	0.449
ASZ78_003477	ASZ78_011805	A0A226MH85	A0A226MRP7	BAR domain-containing protein.	GED domain-containing protein.	0.752