(23 nodes) Embryonic digestive tract development network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_001339	Uncharacterized protein. (292 aa)
	ASZ78_006531	Uncharacterized protein. (224 aa)
	ASZ78_015499	Uncharacterized protein. (96 aa)
	ASZ78_015498	Uncharacterized protein. (84 aa)
	ASZ78_015497	Uncharacterized protein. (106 aa)
	CXCL8	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family. (95 aa)
	ASZ78_002298	TGF_BETA_2 domain-containing protein. (199 aa)
	ASZ78_008521	RRM domain-containing protein. (197 aa)
	ASZ78_008243	HMG box domain-containing protein. (496 aa)
	ASZ78_005446	Fork-head domain-containing protein. (406 aa)
	ASZ78_006140	Fork-head domain-containing protein. (387 aa)
	ASZ78_002628	Protein kinase domain-containing protein. (452 aa)
	ASZ78_003868	PIP49_C domain-containing protein. (497 aa)
	ASZ78_003696	Uncharacterized protein. (162 aa)
	ASZ78_009745	HNF-1_N domain-containing protein. (268 aa)
	ASZ78_014615	Uncharacterized protein. (477 aa)
	ASZ78_011580	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (175 aa)
	ASZ78_013089	Nipped-B protein. (2121 aa)
	ASZ78_003552	Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
	ASZ78_015246	Homeobox domain-containing protein. (370 aa)
	ASZ78_010036	BHLH domain-containing protein. (196 aa)
	ASZ78_012270	Homeobox protein. (333 aa)
	ASZ78_011327	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (408 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001339	ASZ78_006531	A0A226MCB3	A0A226MCW7	Uncharacterized protein.	Uncharacterized protein.	0.899
ASZ78_001339	ASZ78_015497	A0A226MCB3	A0A226MDY2	Uncharacterized protein.	Uncharacterized protein.	0.923
ASZ78_001339	ASZ78_015498	A0A226MCB3	A0A226MDD4	Uncharacterized protein.	Uncharacterized protein.	0.899
ASZ78_002298	ASZ78_003552	A0A226MIE7	A0A226NHF3	TGF_BETA_2 domain-containing protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.949
ASZ78_002298	ASZ78_008243	A0A226MIE7	A0A226MR05	TGF_BETA_2 domain-containing protein.	HMG box domain-containing protein.	0.529
ASZ78_003552	ASZ78_002298	A0A226NHF3	A0A226MIE7	Transforming growth factor beta; Belongs to the TGF-beta family.	TGF_BETA_2 domain-containing protein.	0.949
ASZ78_003552	ASZ78_008243	A0A226NHF3	A0A226MR05	Transforming growth factor beta; Belongs to the TGF-beta family.	HMG box domain-containing protein.	0.578
ASZ78_005446	ASZ78_011327	A0A226MS89	A0A226NPC4	Fork-head domain-containing protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.442
ASZ78_005446	ASZ78_015246	A0A226MS89	A0A226NKS6	Fork-head domain-containing protein.	Homeobox domain-containing protein.	0.479
ASZ78_006140	ASZ78_011327	A0A226MYY5	A0A226NPC4	Fork-head domain-containing protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.449
ASZ78_006531	ASZ78_001339	A0A226MCW7	A0A226MCB3	Uncharacterized protein.	Uncharacterized protein.	0.899
ASZ78_006531	ASZ78_013089	A0A226MCW7	A0A226NH20	Uncharacterized protein.	Nipped-B protein.	0.883
ASZ78_006531	ASZ78_015497	A0A226MCW7	A0A226MDY2	Uncharacterized protein.	Uncharacterized protein.	0.888
ASZ78_006531	ASZ78_015498	A0A226MCW7	A0A226MDD4	Uncharacterized protein.	Uncharacterized protein.	0.888
ASZ78_006531	ASZ78_015499	A0A226MCW7	A0A226MDC5	Uncharacterized protein.	Uncharacterized protein.	0.925
ASZ78_008243	ASZ78_002298	A0A226MR05	A0A226MIE7	HMG box domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.529
ASZ78_008243	ASZ78_003552	A0A226MR05	A0A226NHF3	HMG box domain-containing protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.578
ASZ78_008243	ASZ78_011327	A0A226MR05	A0A226NPC4	HMG box domain-containing protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.808
ASZ78_011327	ASZ78_005446	A0A226NPC4	A0A226MS89	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Fork-head domain-containing protein.	0.442
ASZ78_011327	ASZ78_006140	A0A226NPC4	A0A226MYY5	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Fork-head domain-containing protein.	0.449