(42 nodes) Dendrite morphogenesis network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_005413	Uncharacterized protein. (119 aa)
	ASZ78_009195	Uncharacterized protein. (185 aa)
	ASZ78_010659	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (386 aa)
	ASZ78_007850	ANK_REP_REGION domain-containing protein. (74 aa)
	ASZ78_007849	Uncharacterized protein. (168 aa)
	ASZ78_012607	Uncharacterized protein. (1360 aa)
	ASZ78_012082	Uncharacterized protein. (903 aa)
	ASZ78_012828	Uncharacterized protein. (233 aa)
	ASZ78_000072	SH3 domain-containing protein. (292 aa)
	ASZ78_015599	Uncharacterized protein. (129 aa)
	ASZ78_001422	Uncharacterized protein; Belongs to the DOCK family. (2041 aa)
	ASZ78_016482	Uncharacterized protein. (275 aa)
	ASZ78_006698	BTB domain-containing protein. (520 aa)
	ASZ78_005314	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (737 aa)
	ASZ78_010103	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (478 aa)
	ASZ78_006094	Uncharacterized protein. (166 aa)
	ASZ78_006105	Uncharacterized protein. (359 aa)
	ASZ78_001336	Uncharacterized protein. (496 aa)
	ASZ78_010219	DMAP-interaction domain-containing protein. (1552 aa)
	ASZ78_010418	Uncharacterized protein. (84 aa)
	ASZ78_002323	Sulfotransferase; Belongs to the sulfotransferase 1 family. (309 aa)
	ASZ78_010531	Uncharacterized protein. (702 aa)
	ASZ78_013932	Protein kinase domain-containing protein. (514 aa)
	ASZ78_013178	ANK_REP_REGION domain-containing protein. (1016 aa)
	ASZ78_006525	SH3 domain-containing protein. (160 aa)
	ASZ78_006524	ANK_REP_REGION domain-containing protein. (451 aa)
	ASZ78_003694	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (224 aa)
	ASZ78_005946	C2H2-type domain-containing protein. (297 aa)
	ASZ78_007379	Uncharacterized protein. (393 aa)
	ASZ78_016042	Uncharacterized protein. (874 aa)
	ASZ78_013834	Uncharacterized protein. (104 aa)
	ASZ78_007285	Uncharacterized protein. (297 aa)
	ASZ78_007380	Uncharacterized protein. (565 aa)
	ASZ78_001591	Uncharacterized protein. (809 aa)
	ASZ78_016745	Uncharacterized protein. (276 aa)
	ASZ78_014139	Uncharacterized protein. (117 aa)
	ASZ78_014141	FERM domain-containing protein. (800 aa)
	ASZ78_016370	Uncharacterized protein. (125 aa)
	ASZ78_016371	Uncharacterized protein. (207 aa)
	ASZ78_014140	Uncharacterized protein. (589 aa)
	ASZ78_014248	Uncharacterized protein. (1814 aa)
	ASZ78_004906	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (201 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000072	ASZ78_001591	A0A226MNY1	A0A226NCH6	SH3 domain-containing protein.	Uncharacterized protein.	0.529
ASZ78_000072	ASZ78_006094	A0A226MNY1	A0A226MZN6	SH3 domain-containing protein.	Uncharacterized protein.	0.870
ASZ78_000072	ASZ78_006105	A0A226MNY1	A0A226MZR0	SH3 domain-containing protein.	Uncharacterized protein.	0.526
ASZ78_000072	ASZ78_007285	A0A226MNY1	A0A226NBN4	SH3 domain-containing protein.	Uncharacterized protein.	0.456
ASZ78_000072	ASZ78_010531	A0A226MNY1	A0A226N3E5	SH3 domain-containing protein.	Uncharacterized protein.	0.526
ASZ78_001336	ASZ78_006094	A0A226N0Q7	A0A226MZN6	Uncharacterized protein.	Uncharacterized protein.	0.555
ASZ78_001336	ASZ78_007379	A0A226N0Q7	A0A226NBH9	Uncharacterized protein.	Uncharacterized protein.	0.923
ASZ78_001422	ASZ78_006094	A0A226MPV9	A0A226MZN6	Uncharacterized protein; Belongs to the DOCK family.	Uncharacterized protein.	0.951
ASZ78_001591	ASZ78_000072	A0A226NCH6	A0A226MNY1	Uncharacterized protein.	SH3 domain-containing protein.	0.529
ASZ78_001591	ASZ78_006094	A0A226NCH6	A0A226MZN6	Uncharacterized protein.	Uncharacterized protein.	0.444
ASZ78_001591	ASZ78_007285	A0A226NCH6	A0A226NBN4	Uncharacterized protein.	Uncharacterized protein.	0.454
ASZ78_003694	ASZ78_006094	A0A226N9F0	A0A226MZN6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.452
ASZ78_003694	ASZ78_007285	A0A226N9F0	A0A226NBN4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.713
ASZ78_003694	ASZ78_016745	A0A226N9F0	A0A226NJK2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.511
ASZ78_005314	ASZ78_010659	A0A226MW22	A0A226MM79	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.911
ASZ78_005413	ASZ78_012828	A0A226MJL2	A0A226M8L7	Uncharacterized protein.	Uncharacterized protein.	0.805
ASZ78_005413	ASZ78_016482	A0A226MJL2	A0A226MPX9	Uncharacterized protein.	Uncharacterized protein.	0.407
ASZ78_006094	ASZ78_000072	A0A226MZN6	A0A226MNY1	Uncharacterized protein.	SH3 domain-containing protein.	0.870
ASZ78_006094	ASZ78_001336	A0A226MZN6	A0A226N0Q7	Uncharacterized protein.	Uncharacterized protein.	0.555
ASZ78_006094	ASZ78_001422	A0A226MZN6	A0A226MPV9	Uncharacterized protein.	Uncharacterized protein; Belongs to the DOCK family.	0.951