(25 nodes) Defense response to Gram-negative bacterium network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_016601	TIR domain-containing protein. (366 aa)
	ASZ78_010856	Uncharacterized protein. (195 aa)
	ASZ78_010858	Uncharacterized protein. (162 aa)
	ASZ78_010862	Uncharacterized protein. (160 aa)
	ASZ78_011135	Uncharacterized protein. (79 aa)
	ASZ78_010661	Uncharacterized protein. (541 aa)
	ASZ78_011021	Uncharacterized protein. (206 aa)
	ASZ78_007746	Uncharacterized protein; Belongs to the peptidase S1 family. (629 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (293 aa)
	ASZ78_006357	Uncharacterized protein. (478 aa)
	ASZ78_001964	Uncharacterized protein. (208 aa)
	ASZ78_006359	BPI1 domain-containing protein. (325 aa)
	ASZ78_012626	Uncharacterized protein. (77 aa)
	ASZ78_012622	MACPF domain-containing protein. (583 aa)
	ASZ78_004457	Ribosomal_L7Ae domain-containing protein. (132 aa)
	ASZ78_016209	Uncharacterized protein. (252 aa)
	ASZ78_016207	Uncharacterized protein. (154 aa)
	ASZ78_016198	Uncharacterized protein. (151 aa)
	ASZ78_016208	Uncharacterized protein. (148 aa)
	ASZ78_003652	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (143 aa)
	ASZ78_003696	Uncharacterized protein. (162 aa)
	ASZ78_006008	Uncharacterized protein; Belongs to the serpin family. (861 aa)
	ASZ78_005493	Uncharacterized protein. (417 aa)
	ASZ78_015091	Uncharacterized protein. (1321 aa)
	ASZ78_009641	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family. (1107 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001964	ASZ78_009641	A0A226MUY3	A0A226NN17	Uncharacterized protein.	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	0.766
ASZ78_001964	ASZ78_016601	A0A226MUY3	A0A226MCY5	Uncharacterized protein.	TIR domain-containing protein.	0.455
ASZ78_005493	ASZ78_009641	A0A226NJU6	A0A226NN17	Uncharacterized protein.	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	0.619
ASZ78_005493	ASZ78_016601	A0A226NJU6	A0A226MCY5	Uncharacterized protein.	TIR domain-containing protein.	0.412
ASZ78_006008	ASZ78_007746	A0A226NI85	A0A226MQS7	Uncharacterized protein; Belongs to the serpin family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.850
ASZ78_006357	ASZ78_009641	A0A226MUW7	A0A226NN17	Uncharacterized protein.	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	0.495
ASZ78_006357	ASZ78_016601	A0A226MUW7	A0A226MCY5	Uncharacterized protein.	TIR domain-containing protein.	0.412
ASZ78_006359	ASZ78_009641	A0A226MV48	A0A226NN17	BPI1 domain-containing protein.	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	0.495
ASZ78_006359	ASZ78_016601	A0A226MV48	A0A226MCY5	BPI1 domain-containing protein.	TIR domain-containing protein.	0.412
ASZ78_007746	ASZ78_006008	A0A226MQS7	A0A226NI85	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the serpin family.	0.850
ASZ78_009641	ASZ78_001964	A0A226NN17	A0A226MUY3	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.766
ASZ78_009641	ASZ78_005493	A0A226NN17	A0A226NJU6	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.619
ASZ78_009641	ASZ78_006357	A0A226NN17	A0A226MUW7	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.495
ASZ78_009641	ASZ78_006359	A0A226NN17	A0A226MV48	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	BPI1 domain-containing protein.	0.495
ASZ78_009641	ASZ78_010862	A0A226NN17	A0A226MGB8	TIR domain-containing protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.722
ASZ78_010661	ASZ78_010858	A0A226MM94	A0A226MFK6	Uncharacterized protein.	Uncharacterized protein.	0.516
ASZ78_010661	ASZ78_010862	A0A226MM94	A0A226MGB8	Uncharacterized protein.	Uncharacterized protein.	0.544
ASZ78_010661	ASZ78_011021	A0A226MM94	A0A226MQ00	Uncharacterized protein.	Uncharacterized protein.	0.618
ASZ78_010856	ASZ78_016198	A0A226MFK1	A0A226N8H3	Uncharacterized protein.	Uncharacterized protein.	0.506
ASZ78_010856	ASZ78_016208	A0A226MFK1	A0A226N8H5	Uncharacterized protein.	Uncharacterized protein.	0.506