(11 nodes) Regulation of membrane protein ectodomain proteolysis network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_003581	Zn_dep_PLPC domain-containing protein. (661 aa)
	ASZ78_004551	Uncharacterized protein. (49 aa)
	ASZ78_004546	Uncharacterized protein. (950 aa)
	ASZ78_011449	Uncharacterized protein; Belongs to the peptidase M16 family. (1081 aa)
	ASZ78_010754	Uncharacterized protein. (871 aa)
	ASZ78_006361	NTR domain-containing protein. (224 aa)
	ASZ78_013643	NTR domain-containing protein. (220 aa)
	ASZ78_005893	NTR domain-containing protein. (191 aa)
	ASZ78_011580	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (175 aa)
	ASZ78_003720	Uncharacterized protein. (691 aa)
	ASZ78_015795	Uncharacterized protein. (175 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_005893	ASZ78_015795	A0A226N1Q5	A0A226NI05	NTR domain-containing protein.	Uncharacterized protein.	0.486
ASZ78_006361	ASZ78_013643	A0A226MVG9	A0A226N179	NTR domain-containing protein.	NTR domain-containing protein.	0.615
ASZ78_006361	ASZ78_015795	A0A226MVG9	A0A226NI05	NTR domain-containing protein.	Uncharacterized protein.	0.486
ASZ78_011580	ASZ78_015795	A0A226NFS4	A0A226NI05	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.648
ASZ78_013643	ASZ78_006361	A0A226N179	A0A226MVG9	NTR domain-containing protein.	NTR domain-containing protein.	0.615
ASZ78_013643	ASZ78_015795	A0A226N179	A0A226NI05	NTR domain-containing protein.	Uncharacterized protein.	0.594
ASZ78_015795	ASZ78_005893	A0A226NI05	A0A226N1Q5	Uncharacterized protein.	NTR domain-containing protein.	0.486
ASZ78_015795	ASZ78_006361	A0A226NI05	A0A226MVG9	Uncharacterized protein.	NTR domain-containing protein.	0.486
ASZ78_015795	ASZ78_011580	A0A226NI05	A0A226NFS4	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.648
ASZ78_015795	ASZ78_013643	A0A226NI05	A0A226N179	Uncharacterized protein.	NTR domain-containing protein.	0.594