(22 nodes) Adipose tissue development network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_015075	Uncharacterized protein. (348 aa)
	ASZ78_005767	Uncharacterized protein. (1266 aa)
	ASZ78_010642	Uncharacterized protein. (189 aa)
	ASZ78_013288	PX domain-containing protein. (82 aa)
	ASZ78_013287	Uncharacterized protein. (740 aa)
	ASZ78_006688	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (168 aa)
	ASZ78_016093	TPR_REGION domain-containing protein. (465 aa)
	ASZ78_012616	Uncharacterized protein. (217 aa)
	ASZ78_012615	Uncharacterized protein. (1089 aa)
	ASZ78_016539	RRM domain-containing protein. (814 aa)
	ASZ78_013930	MIT domain-containing protein. (653 aa)
	ASZ78_015074	Uncharacterized protein. (1632 aa)
	ASZ78_008174	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (996 aa)
	ASZ78_008780	Uncharacterized protein. (247 aa)
	ASZ78_013824	ARID domain-containing protein. (86 aa)
	ASZ78_013822	Uncharacterized protein. (782 aa)
	ASZ78_008561	Uncharacterized protein. (106 aa)
	ASZ78_004011	Uncharacterized protein. (645 aa)
	ASZ78_015860	Uncharacterized protein. (463 aa)
	ASZ78_004649	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (336 aa)
	ASZ78_016773	Uncharacterized protein. (1141 aa)
	ASZ78_002202	HMG box domain-containing protein. (470 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_008174	ASZ78_010642	A0A226NAP4	A0A226MNN0	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Uncharacterized protein.	0.980
ASZ78_010642	ASZ78_008174	A0A226MNN0	A0A226NAP4	Uncharacterized protein.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.980
ASZ78_012615	ASZ78_016773	A0A226MWM0	A0A226NJP6	Uncharacterized protein.	Uncharacterized protein.	0.467
ASZ78_012616	ASZ78_016773	A0A226MWI5	A0A226NJP6	Uncharacterized protein.	Uncharacterized protein.	0.467
ASZ78_013287	ASZ78_013288	A0A226MRY3	A0A226MRR9	Uncharacterized protein.	PX domain-containing protein.	0.860
ASZ78_013288	ASZ78_013287	A0A226MRR9	A0A226MRY3	PX domain-containing protein.	Uncharacterized protein.	0.860
ASZ78_013822	ASZ78_013824	A0A226NCE1	A0A226NBL5	Uncharacterized protein.	ARID domain-containing protein.	0.899
ASZ78_013824	ASZ78_013822	A0A226NBL5	A0A226NCE1	ARID domain-containing protein.	Uncharacterized protein.	0.899
ASZ78_015074	ASZ78_015075	A0A226N4T7	A0A226N460	Uncharacterized protein.	Uncharacterized protein.	0.920
ASZ78_015075	ASZ78_015074	A0A226N460	A0A226N4T7	Uncharacterized protein.	Uncharacterized protein.	0.920
ASZ78_016773	ASZ78_012615	A0A226NJP6	A0A226MWM0	Uncharacterized protein.	Uncharacterized protein.	0.467
ASZ78_016773	ASZ78_012616	A0A226NJP6	A0A226MWI5	Uncharacterized protein.	Uncharacterized protein.	0.467