(66 nodes) Regulation of protein tyrosine kinase activity network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014396	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (203 aa)
	ASZ78_001276	NtA domain-containing protein. (181 aa)
	ASZ78_011168	Uncharacterized protein. (536 aa)
	ASZ78_007918	Uncharacterized protein. (707 aa)
	ASZ78_008432	Uncharacterized protein. (1316 aa)
	ASZ78_013157	Uncharacterized protein. (204 aa)
	ASZ78_007921	EGF-like domain-containing protein. (212 aa)
	ASZ78_014913	Uncharacterized protein. (628 aa)
	ASZ78_014912	Uncharacterized protein. (123 aa)
	ASZ78_004799	Ig-like domain-containing protein. (405 aa)
	ASZ78_004981	Inhibitor_Mig-6 domain-containing protein. (489 aa)
	ASZ78_010759	Uncharacterized protein. (615 aa)
	ASZ78_012734	EGF-like domain-containing protein. (171 aa)
	ASZ78_002462	Uncharacterized protein. (391 aa)
	ASZ78_012494	GMP_PDE_delta domain-containing protein. (220 aa)
	ASZ78_010456	Uncharacterized protein. (615 aa)
	ASZ78_008460	Uncharacterized protein. (574 aa)
	ASZ78_012769	Uncharacterized protein. (113 aa)
	ASZ78_016910	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1024 aa)
	ASZ78_002671	DAGKa domain-containing protein. (215 aa)
	ASZ78_009254	LisH domain-containing protein. (368 aa)
	ASZ78_013361	FERM domain-containing protein. (225 aa)
	ASZ78_013358	Protein kinase domain-containing protein. (431 aa)
	ASZ78_016393	Uncharacterized protein. (178 aa)
	ASZ78_017030	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (229 aa)
	ASZ78_000072	SH3 domain-containing protein. (292 aa)
	ASZ78_014332	Motilin_assoc domain-containing protein. (81 aa)
	ASZ78_012579	Uncharacterized protein. (799 aa)
	ASZ78_012580	Uncharacterized protein. (101 aa)
	ASZ78_014082	Uncharacterized protein. (128 aa)
	ASZ78_013515	EGF-like domain-containing protein. (521 aa)
	ASZ78_012871	Uncharacterized protein. (1441 aa)
	ASZ78_002826	SH3 domain-containing protein. (814 aa)
	ASZ78_013850	Uncharacterized protein. (744 aa)
	ASZ78_001305	Uncharacterized protein. (438 aa)
	ASZ78_012680	G_PROTEIN_RECEP_F3_4 domain-containing protein. (371 aa)
	ASZ78_013371	Uncharacterized protein. (988 aa)
	ASZ78_003757	Uncharacterized protein. (375 aa)
	ASZ78_001274	Uncharacterized protein. (1876 aa)
	ASZ78_006176	EGF-like domain-containing protein. (110 aa)
	ASZ78_006170	G_PROTEIN_RECEP_F1_2 domain-containing protein. (467 aa)
	ASZ78_016900	Uncharacterized protein. (828 aa)
	ASZ78_015680	IRS-type PTB domain-containing protein. (536 aa)
	ASZ78_009478	Uncharacterized protein. (702 aa)
	ASZ78_013186	Uncharacterized protein. (827 aa)
	ASZ78_001921	Uncharacterized protein. (481 aa)
	ASZ78_004825	SH3 domain-containing protein. (908 aa)
	ASZ78_008952	AIP3 domain-containing protein. (1090 aa)
	ASZ78_006838	Uncharacterized protein. (685 aa)
	ASZ78_016303	Uncharacterized protein. (388 aa)
	ASZ78_016042	Uncharacterized protein. (874 aa)
	ASZ78_001562	Non-specific serine/threonine protein kinase. (525 aa)
	ASZ78_017101	SERPIN domain-containing protein; Belongs to the serpin family. (370 aa)
	ASZ78_015457	CTCK domain-containing protein. (188 aa)
	ASZ78_016066	ANK_REP_REGION domain-containing protein. (184 aa)
	ASZ78_016065	Uncharacterized protein. (1079 aa)
	ASZ78_002674	Uncharacterized protein. (427 aa)
	ASZ78_006658	EGF-like domain-containing protein. (153 aa)
	ASZ78_006657	EGF-like domain-containing protein. (217 aa)
	ASZ78_012469	Diacylglycerol kinase. (1945 aa)
	ASZ78_006655	EGF-like domain-containing protein. (210 aa)
	ASZ78_003001	Tyrosine-protein phosphatase domain-containing protein. (318 aa)
	ASZ78_015801	Uncharacterized protein. (124 aa)
	ASZ78_005518	Uncharacterized protein. (536 aa)
	ASZ78_016680	Uncharacterized protein. (924 aa)
	ASZ78_005245	Integrin beta; Belongs to the integrin beta chain family. (795 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000072	ASZ78_001562	A0A226MNY1	A0A226NCC4	SH3 domain-containing protein.	Non-specific serine/threonine protein kinase.	0.592
ASZ78_000072	ASZ78_002826	A0A226MNY1	A0A226MHW4	SH3 domain-containing protein.	SH3 domain-containing protein.	0.566
ASZ78_000072	ASZ78_004825	A0A226MNY1	A0A226N741	SH3 domain-containing protein.	SH3 domain-containing protein.	0.597
ASZ78_000072	ASZ78_009478	A0A226MNY1	A0A226N4J3	SH3 domain-containing protein.	Uncharacterized protein.	0.585
ASZ78_000072	ASZ78_013358	A0A226MNY1	A0A226MQA8	SH3 domain-containing protein.	Protein kinase domain-containing protein.	0.504
ASZ78_000072	ASZ78_013361	A0A226MNY1	A0A226MQB5	SH3 domain-containing protein.	FERM domain-containing protein.	0.504
ASZ78_001274	ASZ78_001276	A0A226N186	A0A226N0F0	Uncharacterized protein.	NtA domain-containing protein.	0.899
ASZ78_001274	ASZ78_005245	A0A226N186	A0A226MZQ1	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.535
ASZ78_001274	ASZ78_015680	A0A226N186	A0A226N3H0	Uncharacterized protein.	IRS-type PTB domain-containing protein.	0.700
ASZ78_001274	ASZ78_016042	A0A226N186	A0A226NBJ2	Uncharacterized protein.	Uncharacterized protein.	0.584
ASZ78_001276	ASZ78_001274	A0A226N0F0	A0A226N186	NtA domain-containing protein.	Uncharacterized protein.	0.899
ASZ78_001276	ASZ78_005245	A0A226N0F0	A0A226MZQ1	NtA domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.457
ASZ78_001276	ASZ78_015680	A0A226N0F0	A0A226N3H0	NtA domain-containing protein.	IRS-type PTB domain-containing protein.	0.444
ASZ78_001276	ASZ78_016042	A0A226N0F0	A0A226NBJ2	NtA domain-containing protein.	Uncharacterized protein.	0.584
ASZ78_001305	ASZ78_011168	A0A226ME78	A0A226N0M3	Uncharacterized protein.	Uncharacterized protein.	0.736
ASZ78_001305	ASZ78_016900	A0A226ME78	A0A226N390	Uncharacterized protein.	Uncharacterized protein.	0.497
ASZ78_001562	ASZ78_000072	A0A226NCC4	A0A226MNY1	Non-specific serine/threonine protein kinase.	SH3 domain-containing protein.	0.592
ASZ78_001562	ASZ78_005245	A0A226NCC4	A0A226MZQ1	Non-specific serine/threonine protein kinase.	Integrin beta; Belongs to the integrin beta chain family.	0.618
ASZ78_001562	ASZ78_016303	A0A226NCC4	A0A226NAW6	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.707
ASZ78_001921	ASZ78_013186	A0A226N6Z6	A0A226N4P4	Uncharacterized protein.	Uncharacterized protein.	0.582