(12 nodes) Secondary palate development network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_002978	Uncharacterized protein. (2291 aa)
	ASZ78_011879	SNF2_N domain-containing protein. (183 aa)
	ASZ78_004530	Uncharacterized protein. (651 aa)
	ASZ78_004211	Mothers against decapentaplegic homolog. (479 aa)
	ASZ78_012087	Integrin beta; Belongs to the integrin beta chain family. (722 aa)
	ASZ78_013787	Uncharacterized protein. (437 aa)
	ASZ78_013792	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (214 aa)
	ASZ78_006483	Uncharacterized protein. (680 aa)
	ASZ78_005701	Uncharacterized protein. (2862 aa)
	ASZ78_008666	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (425 aa)
	ASZ78_014365	HMG box domain-containing protein. (330 aa)
	ASZ78_011366	Integrin beta; Belongs to the integrin beta chain family. (611 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_004211	ASZ78_008666	A0A226MF11	A0A226NL83	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.922
ASZ78_004211	ASZ78_014365	A0A226MF11	A0A226NLH1	Mothers against decapentaplegic homolog.	HMG box domain-containing protein.	0.930
ASZ78_004530	ASZ78_012087	A0A226MDU4	A0A226MIF7	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.486
ASZ78_008666	ASZ78_004211	A0A226NL83	A0A226MF11	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.922
ASZ78_011366	ASZ78_012087	A0A226NN38	A0A226MIF7	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.749
ASZ78_012087	ASZ78_004530	A0A226MIF7	A0A226MDU4	Integrin beta; Belongs to the integrin beta chain family.	Uncharacterized protein.	0.486
ASZ78_012087	ASZ78_011366	A0A226MIF7	A0A226NN38	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.749
ASZ78_013792	ASZ78_014365	A0A226N4M2	A0A226NLH1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	HMG box domain-containing protein.	0.451
ASZ78_014365	ASZ78_004211	A0A226NLH1	A0A226MF11	HMG box domain-containing protein.	Mothers against decapentaplegic homolog.	0.930
ASZ78_014365	ASZ78_013792	A0A226NLH1	A0A226N4M2	HMG box domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.451