(20 nodes) Negative regulation of intracellular protein transport network (Callipepla squamata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	ASZ78_011044	Uncharacterized protein. (255 aa)
	ASZ78_015785	OTU domain-containing protein. (319 aa)
	ASZ78_016286	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (138 aa)
	ASZ78_008754	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (239 aa)
	ASZ78_000139	BAG domain-containing protein. (528 aa)
	ASZ78_003694	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (224 aa)
	ASZ78_014750	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	ASZ78_010808	BAG domain-containing protein. (260 aa)
	ASZ78_013183	PID domain-containing protein. (200 aa)
	ASZ78_000726	Uncharacterized protein. (770 aa)
	ASZ78_006316	Deacetylase sirtuin-type domain-containing protein. (359 aa)
	ASZ78_008439	Uncharacterized protein. (195 aa)
	ASZ78_007432	Uncharacterized protein. (2440 aa)
	ASZ78_003627	C1q domain-containing protein. (270 aa)
	ASZ78_003623	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
	ASZ78_002924	Uncharacterized protein. (203 aa)
	ASZ78_012529	IPPc domain-containing protein. (455 aa)
	ASZ78_012215	Uncharacterized protein. (108 aa)
	ASZ78_006122	Uncharacterized protein. (134 aa)
	ASZ78_004356	RanGAP1_C domain-containing protein. (547 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000139	ASZ78_010808	A0A226NA32	A0A226N5C3	BAG domain-containing protein.	BAG domain-containing protein.	0.638
ASZ78_000139	ASZ78_011044	A0A226NA32	A0A226MGF4	BAG domain-containing protein.	Uncharacterized protein.	0.426
ASZ78_000726	ASZ78_011044	A0A226N2D2	A0A226MGF4	Uncharacterized protein.	Uncharacterized protein.	0.685
ASZ78_003623	ASZ78_011044	A0A226MTL8	A0A226MGF4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.951
ASZ78_003623	ASZ78_013183	A0A226MTL8	A0A226N4S0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	PID domain-containing protein.	0.535
ASZ78_004356	ASZ78_011044	A0A226MGT7	A0A226MGF4	RanGAP1_C domain-containing protein.	Uncharacterized protein.	0.768
ASZ78_008754	ASZ78_011044	A0A226NB18	A0A226MGF4	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Uncharacterized protein.	0.582
ASZ78_010808	ASZ78_000139	A0A226N5C3	A0A226NA32	BAG domain-containing protein.	BAG domain-containing protein.	0.638
ASZ78_011044	ASZ78_000139	A0A226MGF4	A0A226NA32	Uncharacterized protein.	BAG domain-containing protein.	0.426
ASZ78_011044	ASZ78_000726	A0A226MGF4	A0A226N2D2	Uncharacterized protein.	Uncharacterized protein.	0.685
ASZ78_011044	ASZ78_003623	A0A226MGF4	A0A226MTL8	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.951
ASZ78_011044	ASZ78_004356	A0A226MGF4	A0A226MGT7	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.768
ASZ78_011044	ASZ78_008754	A0A226MGF4	A0A226NB18	Uncharacterized protein.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.582
ASZ78_011044	ASZ78_016286	A0A226MGF4	A0A226NBY5	Uncharacterized protein.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.582
ASZ78_013183	ASZ78_003623	A0A226N4S0	A0A226MTL8	PID domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.535
ASZ78_016286	ASZ78_011044	A0A226NBY5	A0A226MGF4	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Uncharacterized protein.	0.582