(6 nodes) Mesenchymal cell apoptotic process network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_013539	Homeobox domain-containing protein. (149 aa)
	ASZ78_012083	Uncharacterized protein. (145 aa)
	ASZ78_008243	HMG box domain-containing protein. (496 aa)
	ASZ78_009745	HNF-1_N domain-containing protein. (268 aa)
	ASZ78_016633	Uncharacterized protein. (391 aa)
	ASZ78_016662	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (376 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_008243	ASZ78_012083	A0A226MR05	A0A226M6Y9	HMG box domain-containing protein.	Uncharacterized protein.	0.557
ASZ78_008243	ASZ78_013539	A0A226MR05	A0A226NHK8	HMG box domain-containing protein.	Homeobox domain-containing protein.	0.557
ASZ78_012083	ASZ78_008243	A0A226M6Y9	A0A226MR05	Uncharacterized protein.	HMG box domain-containing protein.	0.557
ASZ78_012083	ASZ78_013539	A0A226M6Y9	A0A226NHK8	Uncharacterized protein.	Homeobox domain-containing protein.	0.849
ASZ78_013539	ASZ78_008243	A0A226NHK8	A0A226MR05	Homeobox domain-containing protein.	HMG box domain-containing protein.	0.557
ASZ78_013539	ASZ78_012083	A0A226NHK8	A0A226M6Y9	Homeobox domain-containing protein.	Uncharacterized protein.	0.849