(12 nodes) Regulation of neuroinflammatory response network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_008987	Uncharacterized protein. (495 aa)
	ASZ78_014922	Uncharacterized protein. (429 aa)
	ASZ78_010154	Lipase_3 domain-containing protein. (909 aa)
	ASZ78_008464	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (426 aa)
	ASZ78_009065	SCY domain-containing protein. (396 aa)
	ASZ78_007652	Interleukin-18. (196 aa)
	ASZ78_013157	Uncharacterized protein. (204 aa)
	ASZ78_007432	Uncharacterized protein. (2440 aa)
	ASZ78_014496	Uncharacterized protein. (306 aa)
	ASZ78_014495	IG domain-containing protein. (181 aa)
	ASZ78_014875	Uncharacterized protein. (192 aa)
	ASZ78_015312	Cystatin domain-containing protein. (165 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_009065	ASZ78_014496	A0A226MTP2	A0A226N5G7	SCY domain-containing protein.	Uncharacterized protein.	0.517
ASZ78_009065	ASZ78_014875	A0A226MTP2	A0A226ND48	SCY domain-containing protein.	Uncharacterized protein.	0.450
ASZ78_014495	ASZ78_014875	A0A226N5N9	A0A226ND48	IG domain-containing protein.	Uncharacterized protein.	0.751
ASZ78_014496	ASZ78_009065	A0A226N5G7	A0A226MTP2	Uncharacterized protein.	SCY domain-containing protein.	0.517
ASZ78_014496	ASZ78_014875	A0A226N5G7	A0A226ND48	Uncharacterized protein.	Uncharacterized protein.	0.984
ASZ78_014875	ASZ78_009065	A0A226ND48	A0A226MTP2	Uncharacterized protein.	SCY domain-containing protein.	0.450
ASZ78_014875	ASZ78_014495	A0A226ND48	A0A226N5N9	Uncharacterized protein.	IG domain-containing protein.	0.751
ASZ78_014875	ASZ78_014496	A0A226ND48	A0A226N5G7	Uncharacterized protein.	Uncharacterized protein.	0.984