(12 nodes) Regulation of secondary metabolite biosynthetic process network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_008098	Uncharacterized protein. (494 aa)
	ASZ78_009348	Uncharacterized protein. (575 aa)
	ASZ78_011194	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (423 aa)
	ASZ78_003225	Uncharacterized protein. (1673 aa)
	ASZ78_015131	G_PROTEIN_RECEP_F1_2 domain-containing protein. (318 aa)
	ASZ78_002350	PDZ domain-containing protein. (318 aa)
	ASZ78_015744	Uncharacterized protein. (424 aa)
	ASZ78_000228	Uncharacterized protein. (467 aa)
	ASZ78_010640	PH domain-containing protein. (640 aa)
	ASZ78_000229	Uncharacterized protein. (145 aa)
	ASZ78_004467	Uncharacterized protein. (322 aa)
	ASZ78_008093	PDZ domain-containing protein. (324 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000228	ASZ78_015744	A0A226MQY5	A0A226NPH1	Uncharacterized protein.	Uncharacterized protein.	0.908
ASZ78_002350	ASZ78_010640	A0A226NHP3	A0A226MHS7	PDZ domain-containing protein.	PH domain-containing protein.	0.862
ASZ78_008093	ASZ78_010640	A0A226MXA0	A0A226MHS7	PDZ domain-containing protein.	PH domain-containing protein.	0.862
ASZ78_009348	ASZ78_011194	A0A226N516	A0A226N6P4	Uncharacterized protein.	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.619
ASZ78_010640	ASZ78_002350	A0A226MHS7	A0A226NHP3	PH domain-containing protein.	PDZ domain-containing protein.	0.862
ASZ78_010640	ASZ78_008093	A0A226MHS7	A0A226MXA0	PH domain-containing protein.	PDZ domain-containing protein.	0.862
ASZ78_011194	ASZ78_009348	A0A226N6P4	A0A226N516	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	Uncharacterized protein.	0.619
ASZ78_015744	ASZ78_000228	A0A226NPH1	A0A226MQY5	Uncharacterized protein.	Uncharacterized protein.	0.908