(32 nodes) Regulation of stem cell differentiation network (Callipepla squamata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Your Input:
	ASZ78_009648	TRUD domain-containing protein. (607 aa)
	ASZ78_002334	Uncharacterized protein. (157 aa)
	ASZ78_009771	Uncharacterized protein. (136 aa)
	ASZ78_005070	Protein kinase domain-containing protein. (215 aa)
	ASZ78_014134	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1083 aa)
	ASZ78_002778	BZIP domain-containing protein. (582 aa)
	ASZ78_011594	Uncharacterized protein. (545 aa)
	ASZ78_013756	Uncharacterized protein. (569 aa)
	ASZ78_008407	Uncharacterized protein. (571 aa)
	ASZ78_002473	Uncharacterized protein. (893 aa)
	ASZ78_007071	HCO3_cotransp domain-containing protein. (846 aa)
	ASZ78_013234	Protein kinase domain-containing protein. (1332 aa)
	ASZ78_006316	Deacetylase sirtuin-type domain-containing protein. (359 aa)
	ASZ78_003107	SET domain-containing protein. (410 aa)
	ASZ78_000379	Uncharacterized protein. (707 aa)
	ASZ78_008968	Protein kinase domain-containing protein. (1282 aa)
	ASZ78_016008	Thyroglobulin type-1 domain-containing protein. (303 aa)
	ASZ78_009768	TBX domain-containing protein. (594 aa)
	ASZ78_009769	Uncharacterized protein. (496 aa)
	ASZ78_007381	Uncharacterized protein; Belongs to the heat shock protein 70 family. (599 aa)
	ASZ78_009770	Uncharacterized protein. (71 aa)
	ASZ78_015693	WD_REPEATS_REGION domain-containing protein. (602 aa)
	ASZ78_016366	RRM domain-containing protein. (225 aa)
	ASZ78_005494	BHLH domain-containing protein. (183 aa)
	ASZ78_013296	Homeobox domain-containing protein. (292 aa)
	ASZ78_009498	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (225 aa)
	ASZ78_008243	HMG box domain-containing protein. (496 aa)
	ASZ78_014308	Uncharacterized protein. (545 aa)
	ASZ78_014307	TBX domain-containing protein. (732 aa)
	ASZ78_013331	OCIA domain-containing protein. (207 aa)
	ASZ78_000101	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (731 aa)
	ASZ78_002298	TGF_BETA_2 domain-containing protein. (199 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000101	ASZ78_009648	A0A226MEF8	A0A226MM06	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	TRUD domain-containing protein.	0.743
ASZ78_000101	ASZ78_015693	A0A226MEF8	A0A226NND7	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	WD_REPEATS_REGION domain-containing protein.	0.524
ASZ78_000379	ASZ78_009498	A0A226N6I9	A0A226MRK3	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.429
ASZ78_002298	ASZ78_008243	A0A226MIE7	A0A226MR05	TGF_BETA_2 domain-containing protein.	HMG box domain-containing protein.	0.529
ASZ78_002298	ASZ78_014134	A0A226MIE7	A0A226ND11	TGF_BETA_2 domain-containing protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.551
ASZ78_002334	ASZ78_014134	A0A226MDL8	A0A226ND11	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.450
ASZ78_002778	ASZ78_005070	A0A226NEY4	A0A226NCX4	BZIP domain-containing protein.	Protein kinase domain-containing protein.	0.932
ASZ78_005070	ASZ78_002778	A0A226NCX4	A0A226NEY4	Protein kinase domain-containing protein.	BZIP domain-containing protein.	0.932
ASZ78_005070	ASZ78_007381	A0A226NCX4	A0A226NBW2	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.598
ASZ78_007381	ASZ78_005070	A0A226NBW2	A0A226NCX4	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Protein kinase domain-containing protein.	0.598
ASZ78_008243	ASZ78_002298	A0A226MR05	A0A226MIE7	HMG box domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.529
ASZ78_008243	ASZ78_014134	A0A226MR05	A0A226ND11	HMG box domain-containing protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.559
ASZ78_008968	ASZ78_011594	A0A226N7T4	A0A226NGZ1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.611
ASZ78_009498	ASZ78_000379	A0A226MRK3	A0A226N6I9	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Uncharacterized protein.	0.429
ASZ78_009648	ASZ78_000101	A0A226MM06	A0A226MEF8	TRUD domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.743
ASZ78_009648	ASZ78_015693	A0A226MM06	A0A226NND7	TRUD domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.520
ASZ78_009768	ASZ78_013296	A0A226NBJ8	A0A226MRR8	TBX domain-containing protein.	Homeobox domain-containing protein.	0.666
ASZ78_009769	ASZ78_013296	A0A226NBM1	A0A226MRR8	Uncharacterized protein.	Homeobox domain-containing protein.	0.786
ASZ78_009770	ASZ78_013296	A0A226NCB2	A0A226MRR8	Uncharacterized protein.	Homeobox domain-containing protein.	0.666
ASZ78_009771	ASZ78_013296	A0A226NCB3	A0A226MRR8	Uncharacterized protein.	Homeobox domain-containing protein.	0.786