(16 nodes) Rough endoplasmic reticulum membrane network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_006954	Uncharacterized protein. (66 aa)
	ASZ78_016525	Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (172 aa)
	ASZ78_008107	Uncharacterized protein. (69 aa)
	ASZ78_011102	Uncharacterized protein. (621 aa)
	ASZ78_005230	Uncharacterized protein. (482 aa)
	ASZ78_009938	Fe2OG dioxygenase domain-containing protein. (691 aa)
	ASZ78_012783	Plug_translocon domain-containing protein. (476 aa)
	ASZ78_001571	Uncharacterized protein. (258 aa)
	ASZ78_010717	Uncharacterized protein. (185 aa)
	ASZ78_006609	J domain-containing protein. (697 aa)
	ASZ78_002286	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	ASZ78_002287	Uncharacterized protein. (129 aa)
	ASZ78_013616	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (136 aa)
	ASZ78_015470	SRP54 domain-containing protein. (642 aa)
	ASZ78_009518	Uncharacterized protein. (421 aa)
	ASZ78_006245	Uncharacterized protein. (451 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001571	ASZ78_006245	A0A226NCF1	A0A226MRY4	Uncharacterized protein.	Uncharacterized protein.	0.658
ASZ78_001571	ASZ78_006609	A0A226NCF1	A0A226NJU0	Uncharacterized protein.	J domain-containing protein.	0.661
ASZ78_001571	ASZ78_006954	A0A226NCF1	A0A226MUP1	Uncharacterized protein.	Uncharacterized protein.	0.600
ASZ78_001571	ASZ78_009518	A0A226NCF1	A0A226MNF6	Uncharacterized protein.	Uncharacterized protein.	0.457
ASZ78_001571	ASZ78_012783	A0A226NCF1	A0A226NBC6	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.658
ASZ78_001571	ASZ78_015470	A0A226NCF1	A0A226ML15	Uncharacterized protein.	SRP54 domain-containing protein.	0.996
ASZ78_002286	ASZ78_002287	A0A226NMZ8	A0A226NN94	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.767
ASZ78_002286	ASZ78_006245	A0A226NMZ8	A0A226MRY4	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.959
ASZ78_002286	ASZ78_006954	A0A226NMZ8	A0A226MUP1	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.657
ASZ78_002286	ASZ78_008107	A0A226NMZ8	A0A226MXI9	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.999
ASZ78_002286	ASZ78_012783	A0A226NMZ8	A0A226NBC6	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Plug_translocon domain-containing protein.	0.959
ASZ78_002286	ASZ78_013616	A0A226NMZ8	A0A226MDE3	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.998
ASZ78_002286	ASZ78_015470	A0A226NMZ8	A0A226ML15	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	SRP54 domain-containing protein.	0.411
ASZ78_002287	ASZ78_002286	A0A226NN94	A0A226NMZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.767
ASZ78_002287	ASZ78_006245	A0A226NN94	A0A226MRY4	Uncharacterized protein.	Uncharacterized protein.	0.959
ASZ78_002287	ASZ78_006954	A0A226NN94	A0A226MUP1	Uncharacterized protein.	Uncharacterized protein.	0.657
ASZ78_002287	ASZ78_008107	A0A226NN94	A0A226MXI9	Uncharacterized protein.	Uncharacterized protein.	0.997
ASZ78_002287	ASZ78_012783	A0A226NN94	A0A226NBC6	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.959
ASZ78_002287	ASZ78_013616	A0A226NN94	A0A226MDE3	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.994
ASZ78_002287	ASZ78_015470	A0A226NN94	A0A226ML15	Uncharacterized protein.	SRP54 domain-containing protein.	0.411