(6 nodes) Rho guanine nucleotide exchange factor 10/17 network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_003256	DH domain-containing protein. (728 aa)
	ASZ78_000006	Uncharacterized protein. (189 aa)
	ASZ78_003257	Uncharacterized protein. (203 aa)
	ASZ78_004979	DH domain-containing protein. (1246 aa)
	ASZ78_000004	Uncharacterized protein. (269 aa)
	ASZ78_000003	DH domain-containing protein. (594 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000003	ASZ78_000004	A0A226ME72	A0A226ME64	DH domain-containing protein.	Uncharacterized protein.	0.919
ASZ78_000003	ASZ78_000006	A0A226ME72	A0A226MEH3	DH domain-containing protein.	Uncharacterized protein.	0.909
ASZ78_000004	ASZ78_000003	A0A226ME64	A0A226ME72	Uncharacterized protein.	DH domain-containing protein.	0.919
ASZ78_000004	ASZ78_000006	A0A226ME64	A0A226MEH3	Uncharacterized protein.	Uncharacterized protein.	0.930
ASZ78_000006	ASZ78_000003	A0A226MEH3	A0A226ME72	Uncharacterized protein.	DH domain-containing protein.	0.909
ASZ78_000006	ASZ78_000004	A0A226MEH3	A0A226ME64	Uncharacterized protein.	Uncharacterized protein.	0.930
ASZ78_003256	ASZ78_003257	A0A226MSK6	A0A226MT73	DH domain-containing protein.	Uncharacterized protein.	0.946
ASZ78_003257	ASZ78_003256	A0A226MT73	A0A226MSK6	Uncharacterized protein.	DH domain-containing protein.	0.946