(24 nodes) DDX58/IFIH1-mediated induction of interferon-alpha/beta network (Callipepla squamata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_016494	IRF tryptophan pentad repeat domain-containing protein. (509 aa)
	ASZ78_004357	Uncharacterized protein. (2454 aa)
	ASZ78_001770	KxDL domain-containing protein. (176 aa)
	ASZ78_007248	HATPase_c domain-containing protein. (609 aa)
	ASZ78_002455	Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (102 aa)
	ASZ78_007094	VWFC domain-containing protein. (283 aa)
	ASZ78_011189	Uncharacterized protein. (980 aa)
	ASZ78_001870	Uncharacterized protein. (911 aa)
	ASZ78_007057	CARD_2 domain-containing protein. (586 aa)
	ASZ78_000952	Uncharacterized protein. (2345 aa)
	ASZ78_001094	Uncharacterized protein. (607 aa)
	ASZ78_001095	SKICH domain-containing protein. (98 aa)
	ASZ78_007447	Uncharacterized protein. (277 aa)
	ASZ78_010421	TPR_REGION domain-containing protein. (583 aa)
	ASZ78_009473	NACHT domain-containing protein. (937 aa)
	ASZ78_009002	Uncharacterized protein. (191 aa)
	ASZ78_009012	Uncharacterized protein. (674 aa)
	ASZ78_005040	HATPase_c domain-containing protein. (491 aa)
	ASZ78_015803	Protein kinase domain-containing protein. (819 aa)
	ASZ78_004663	Uncharacterized protein. (689 aa)
	ASZ78_006802	Protein kinase domain-containing protein. (626 aa)
	ASZ78_004662	Uncharacterized protein. (250 aa)
	ASZ78_008651	Uncharacterized protein. (191 aa)
	ASZ78_010058	Uncharacterized protein. (789 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000952	ASZ78_001870	A0A226MYG1	A0A226MX05	Uncharacterized protein.	Uncharacterized protein.	0.765
ASZ78_000952	ASZ78_004357	A0A226MYG1	A0A226MGM4	Uncharacterized protein.	Uncharacterized protein.	0.997
ASZ78_000952	ASZ78_005040	A0A226MYG1	A0A226NCV2	Uncharacterized protein.	HATPase_c domain-containing protein.	0.541
ASZ78_000952	ASZ78_007248	A0A226MYG1	A0A226MNK8	Uncharacterized protein.	HATPase_c domain-containing protein.	0.541
ASZ78_000952	ASZ78_011189	A0A226MYG1	A0A226MWL5	Uncharacterized protein.	Uncharacterized protein.	0.765
ASZ78_000952	ASZ78_016494	A0A226MYG1	A0A226MDT6	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.914
ASZ78_001094	ASZ78_001095	A0A226MYN8	A0A226MYR1	Uncharacterized protein.	SKICH domain-containing protein.	0.919
ASZ78_001094	ASZ78_006802	A0A226MYN8	A0A226NIU2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.783
ASZ78_001094	ASZ78_010058	A0A226MYN8	A0A226NM61	Uncharacterized protein.	Uncharacterized protein.	0.988
ASZ78_001094	ASZ78_015803	A0A226MYN8	A0A226NIC9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.750
ASZ78_001095	ASZ78_001094	A0A226MYR1	A0A226MYN8	SKICH domain-containing protein.	Uncharacterized protein.	0.919
ASZ78_001095	ASZ78_006802	A0A226MYR1	A0A226NIU2	SKICH domain-containing protein.	Protein kinase domain-containing protein.	0.783
ASZ78_001095	ASZ78_010058	A0A226MYR1	A0A226NM61	SKICH domain-containing protein.	Uncharacterized protein.	0.988
ASZ78_001095	ASZ78_015803	A0A226MYR1	A0A226NIC9	SKICH domain-containing protein.	Protein kinase domain-containing protein.	0.750
ASZ78_001870	ASZ78_000952	A0A226MX05	A0A226MYG1	Uncharacterized protein.	Uncharacterized protein.	0.765
ASZ78_001870	ASZ78_004357	A0A226MX05	A0A226MGM4	Uncharacterized protein.	Uncharacterized protein.	0.844
ASZ78_001870	ASZ78_006802	A0A226MX05	A0A226NIU2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.732
ASZ78_001870	ASZ78_010058	A0A226MX05	A0A226NM61	Uncharacterized protein.	Uncharacterized protein.	0.406
ASZ78_001870	ASZ78_011189	A0A226MX05	A0A226MWL5	Uncharacterized protein.	Uncharacterized protein.	0.923
ASZ78_001870	ASZ78_015803	A0A226MX05	A0A226NIC9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.738