(5 nodes) Axonal growth inhibition (RHOA activation) network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014628	Ig-like domain-containing protein. (164 aa)
	ASZ78_014627	Uncharacterized protein. (368 aa)
	ASZ78_013266	Ig-like domain-containing protein. (558 aa)
	ASZ78_001185	Uncharacterized protein. (980 aa)
	ASZ78_016535	LRRNT domain-containing protein. (437 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_013266	ASZ78_016535	A0A226N843	A0A226MWH6	Ig-like domain-containing protein.	LRRNT domain-containing protein.	0.595
ASZ78_014627	ASZ78_014628	A0A226NDM4	A0A226NEA1	Uncharacterized protein.	Ig-like domain-containing protein.	0.885
ASZ78_014627	ASZ78_016535	A0A226NDM4	A0A226MWH6	Uncharacterized protein.	LRRNT domain-containing protein.	0.773
ASZ78_014628	ASZ78_014627	A0A226NEA1	A0A226NDM4	Ig-like domain-containing protein.	Uncharacterized protein.	0.885
ASZ78_014628	ASZ78_016535	A0A226NEA1	A0A226MWH6	Ig-like domain-containing protein.	LRRNT domain-containing protein.	0.773
ASZ78_016535	ASZ78_013266	A0A226MWH6	A0A226N843	LRRNT domain-containing protein.	Ig-like domain-containing protein.	0.595
ASZ78_016535	ASZ78_014627	A0A226MWH6	A0A226NDM4	LRRNT domain-containing protein.	Uncharacterized protein.	0.773
ASZ78_016535	ASZ78_014628	A0A226MWH6	A0A226NEA1	LRRNT domain-containing protein.	Ig-like domain-containing protein.	0.773