(104 nodes) p75 NTR receptor-mediated signalling network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_006823	Uncharacterized protein. (93 aa)
	ASZ78_008181	Uncharacterized protein. (884 aa)
	ASZ78_009753	Uncharacterized protein. (575 aa)
	ASZ78_004958	Uncharacterized protein. (352 aa)
	ASZ78_004955	Uncharacterized protein. (1325 aa)
	ASZ78_010843	PH domain-containing protein. (124 aa)
	ASZ78_004959	SH3 domain-containing protein. (270 aa)
	ASZ78_004957	Uncharacterized protein. (379 aa)
	ASZ78_001617	Uncharacterized protein. (533 aa)
	ASZ78_016974	Uncharacterized protein. (807 aa)
	ASZ78_014627	Uncharacterized protein. (368 aa)
	ASZ78_014628	Ig-like domain-containing protein. (164 aa)
	ASZ78_004426	Uncharacterized protein. (1507 aa)
	ASZ78_010844	DH domain-containing protein. (314 aa)
	ASZ78_013437	Uncharacterized protein. (166 aa)
	ASZ78_004328	Uncharacterized protein. (267 aa)
	ASZ78_016693	Uncharacterized protein. (826 aa)
	ASZ78_014953	Uncharacterized protein; Belongs to the peptidase C14A family. (371 aa)
	ASZ78_012761	Uncharacterized protein. (169 aa)
	ASZ78_015186	Uncharacterized protein. (1691 aa)
	ASZ78_017039	Uncharacterized protein. (217 aa)
	ASZ78_002929	Uncharacterized protein. (307 aa)
	ASZ78_009102	Uncharacterized protein. (423 aa)
	ASZ78_013074	Uncharacterized protein. (334 aa)
	ASZ78_013078	Uncharacterized protein. (256 aa)
	ASZ78_006042	Uncharacterized protein. (658 aa)
	ASZ78_016772	Uncharacterized protein. (483 aa)
	ASZ78_005461	TGc domain-containing protein. (689 aa)
	ASZ78_015285	Uncharacterized protein. (1320 aa)
	ASZ78_014352	Uncharacterized protein. (836 aa)
	ASZ78_015289	DH domain-containing protein. (710 aa)
	ASZ78_014286	Uncharacterized protein. (1681 aa)
	ASZ78_009527	Uncharacterized protein. (746 aa)
	ASZ78_004872	Uncharacterized protein. (434 aa)
	ASZ78_011359	Uncharacterized protein. (2363 aa)
	ASZ78_015689	Uncharacterized protein. (824 aa)
	ASZ78_009671	DH domain-containing protein. (446 aa)
	ASZ78_000004	Uncharacterized protein. (269 aa)
	ASZ78_000003	DH domain-containing protein. (594 aa)
	ASZ78_000006	Uncharacterized protein. (189 aa)
	ASZ78_003281	Uncharacterized protein; Belongs to the peptidase C14A family. (261 aa)
	ASZ78_012539	Uncharacterized protein. (777 aa)
	ASZ78_011175	PH domain-containing protein. (683 aa)
	ASZ78_013196	Uncharacterized protein. (664 aa)
	ASZ78_000691	Uncharacterized protein. (1813 aa)
	ASZ78_016695	Uncharacterized protein. (371 aa)
	ASZ78_007121	Uncharacterized protein. (257 aa)
	ASZ78_012122	Uncharacterized protein. (712 aa)
	ASZ78_012124	Uncharacterized protein. (155 aa)
	ASZ78_012132	Ncstrn_small domain-containing protein. (720 aa)
	ASZ78_012121	PDZ domain-containing protein. (687 aa)
	ASZ78_011422	Uncharacterized protein. (416 aa)
	ASZ78_001770	KxDL domain-containing protein. (176 aa)
	ASZ78_001786	Uncharacterized protein. (1460 aa)
	ASZ78_009823	Uncharacterized protein. (591 aa)
	ASZ78_015436	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (351 aa)
	ASZ78_009515	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (599 aa)
	ASZ78_015437	Uncharacterized protein. (136 aa)
	ASZ78_011445	Uncharacterized protein. (929 aa)
	ASZ78_011444	Uncharacterized protein. (1256 aa)
	ASZ78_016413	Uncharacterized protein. (181 aa)
	ASZ78_000054	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (502 aa)
	ASZ78_003256	DH domain-containing protein. (728 aa)
	ASZ78_012881	Uncharacterized protein. (368 aa)
	ASZ78_012882	Uncharacterized protein. (351 aa)
	ASZ78_003257	Uncharacterized protein. (203 aa)
	ASZ78_000082	Uncharacterized protein. (505 aa)
	ASZ78_004771	Uncharacterized protein. (1050 aa)
	ASZ78_004786	Uncharacterized protein. (452 aa)
	ASZ78_004486	Bcr-Abl_Oligo domain-containing protein. (205 aa)
	ASZ78_004485	Uncharacterized protein. (867 aa)
	ASZ78_016535	LRRNT domain-containing protein. (437 aa)
	ASZ78_004979	DH domain-containing protein. (1246 aa)
	ASZ78_011189	Uncharacterized protein. (980 aa)
	ASZ78_004996	DH domain-containing protein. (1169 aa)
	ASZ78_004998	Uncharacterized protein. (366 aa)
	ASZ78_003246	Uncharacterized protein. (1254 aa)
	ASZ78_001185	Uncharacterized protein. (980 aa)
	ASZ78_007447	Uncharacterized protein. (277 aa)
	ASZ78_007461	Uncharacterized protein. (488 aa)
	ASZ78_007462	Uncharacterized protein. (326 aa)
	ASZ78_016543	Uncharacterized protein. (158 aa)
	ASZ78_016545	DH domain-containing protein. (208 aa)
	ASZ78_016542	CRAL-TRIO domain-containing protein. (551 aa)
	ASZ78_016546	Uncharacterized protein. (211 aa)
	ASZ78_015020	Uncharacterized protein. (1739 aa)
	ASZ78_016547	Uncharacterized protein. (94 aa)
	ASZ78_013675	Uncharacterized protein. (204 aa)
	ASZ78_001265	PH domain-containing protein. (253 aa)
	ASZ78_011994	Protein kinase domain-containing protein. (391 aa)
	ASZ78_016152	GSAP-16 domain-containing protein. (545 aa)
	ASZ78_006167	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (67 aa)
	ASZ78_002721	CRAL-TRIO domain-containing protein. (667 aa)
	ASZ78_013186	Uncharacterized protein. (827 aa)
	ASZ78_014464	Uncharacterized protein. (695 aa)
	ASZ78_010788	Uncharacterized protein. (724 aa)
	ASZ78_014463	Uncharacterized protein. (53 aa)
	ASZ78_000380	Uncharacterized protein. (720 aa)
	ASZ78_001921	Uncharacterized protein. (481 aa)
	ASZ78_013266	Ig-like domain-containing protein. (558 aa)
	ASZ78_016219	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (299 aa)
	ASZ78_006824	Uncharacterized protein. (704 aa)
	ASZ78_006826	CRAL-TRIO domain-containing protein. (409 aa)
	ASZ78_001673	Uncharacterized protein. (1239 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000003	ASZ78_000004	A0A226ME72	A0A226ME64	DH domain-containing protein.	Uncharacterized protein.	0.919
ASZ78_000003	ASZ78_000006	A0A226ME72	A0A226MEH3	DH domain-containing protein.	Uncharacterized protein.	0.909
ASZ78_000003	ASZ78_004426	A0A226ME72	A0A226NEG9	DH domain-containing protein.	Uncharacterized protein.	0.485
ASZ78_000003	ASZ78_004996	A0A226ME72	A0A226MWS2	DH domain-containing protein.	DH domain-containing protein.	0.414
ASZ78_000003	ASZ78_004998	A0A226ME72	A0A226MX33	DH domain-containing protein.	Uncharacterized protein.	0.414
ASZ78_000003	ASZ78_012121	A0A226ME72	A0A226MKS0	DH domain-containing protein.	PDZ domain-containing protein.	0.485
ASZ78_000003	ASZ78_012122	A0A226ME72	A0A226MKP6	DH domain-containing protein.	Uncharacterized protein.	0.485
ASZ78_000003	ASZ78_012124	A0A226ME72	A0A226MKQ2	DH domain-containing protein.	Uncharacterized protein.	0.485
ASZ78_000003	ASZ78_014286	A0A226ME72	A0A226NNA6	DH domain-containing protein.	Uncharacterized protein.	0.466
ASZ78_000004	ASZ78_000003	A0A226ME64	A0A226ME72	Uncharacterized protein.	DH domain-containing protein.	0.919
ASZ78_000004	ASZ78_000006	A0A226ME64	A0A226MEH3	Uncharacterized protein.	Uncharacterized protein.	0.930
ASZ78_000004	ASZ78_004426	A0A226ME64	A0A226NEG9	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_004996	A0A226ME64	A0A226MWS2	Uncharacterized protein.	DH domain-containing protein.	0.428
ASZ78_000004	ASZ78_004998	A0A226ME64	A0A226MX33	Uncharacterized protein.	Uncharacterized protein.	0.428
ASZ78_000004	ASZ78_012121	A0A226ME64	A0A226MKS0	Uncharacterized protein.	PDZ domain-containing protein.	0.485
ASZ78_000004	ASZ78_012122	A0A226ME64	A0A226MKP6	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_012124	A0A226ME64	A0A226MKQ2	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_014286	A0A226ME64	A0A226NNA6	Uncharacterized protein.	Uncharacterized protein.	0.466
ASZ78_000006	ASZ78_000003	A0A226MEH3	A0A226ME72	Uncharacterized protein.	DH domain-containing protein.	0.909
ASZ78_000006	ASZ78_000004	A0A226MEH3	A0A226ME64	Uncharacterized protein.	Uncharacterized protein.	0.930