78 items (Callipepla squamata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014073	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (197 aa)
	ASZ78_003056	Ribosomal_S17_N domain-containing protein. (79 aa)
	ASZ78_006153	Uncharacterized protein. (97 aa)
	ASZ78_002541	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	ASZ78_017083	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (158 aa)
	ASZ78_007290	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (87 aa)
	ASZ78_013616	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (136 aa)
	ASZ78_007968	Uncharacterized protein. (125 aa)
	ASZ78_013835	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	ASZ78_006752	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (112 aa)
	ASZ78_011844	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (296 aa)
	ASZ78_011289	Uncharacterized protein. (147 aa)
	ASZ78_005418	Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (180 aa)
	ASZ78_004299	W2 domain-containing protein. (441 aa)
	ASZ78_014323	Uncharacterized protein. (135 aa)
	ASZ78_009104	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	ASZ78_001770	KxDL domain-containing protein. (176 aa)
	ASZ78_009511	Uncharacterized protein. (101 aa)
	ASZ78_000586	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	ASZ78_000572	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	ASZ78_013365	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	ASZ78_008259	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (156 aa)
	ASZ78_013291	KOW domain-containing protein. (192 aa)
	ASZ78_003906	Ribosomal_L18_c domain-containing protein. (308 aa)
	ASZ78_011547	Ribosomal_L14e domain-containing protein. (145 aa)
	ASZ78_007694	Tr-type G domain-containing protein. (1219 aa)
	ASZ78_007644	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
	ASZ78_011463	Uncharacterized protein. (50 aa)
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
	ASZ78_016104	Uncharacterized protein. (135 aa)
	ASZ78_009690	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (382 aa)
	ASZ78_004511	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (155 aa)
	ASZ78_004788	Uncharacterized protein. (279 aa)
	ASZ78_004808	Uncharacterized protein. (115 aa)
	ASZ78_005006	Uncharacterized protein. (128 aa)
	ASZ78_012484	Uncharacterized protein. (247 aa)
	ASZ78_008107	Uncharacterized protein. (69 aa)
	ASZ78_008127	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (173 aa)
	ASZ78_011540	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (71 aa)
	ASZ78_014390	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (410 aa)
	ASZ78_004457	Ribosomal_L7Ae domain-containing protein. (132 aa)
	ASZ78_015557	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (100 aa)
	ASZ78_010409	TRASH domain-containing protein. (157 aa)
	ASZ78_015328	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (301 aa)
	ASZ78_010506	Leuk-A4-hydro_C domain-containing protein. (778 aa)
	ASZ78_014470	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	ASZ78_000362	Uncharacterized protein. (151 aa)
	ASZ78_008961	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	ASZ78_008959	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (112 aa)
	ASZ78_013278	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (276 aa)
	ASZ78_001668	Uncharacterized protein. (103 aa)
	ASZ78_008700	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	ASZ78_008351	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	ASZ78_001800	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (180 aa)
	ASZ78_014659	40S ribosomal protein S27. (87 aa)
	ASZ78_011777	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (173 aa)
	ASZ78_011606	Ribosomal_L11 domain-containing protein. (80 aa)
	ASZ78_005716	Ribosomal_S10 domain-containing protein. (119 aa)
	ASZ78_005636	Uncharacterized protein. (160 aa)
	ASZ78_015904	Leuk-A4-hydro_C domain-containing protein. (638 aa)
	ASZ78_006800	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	ASZ78_005600	Uncharacterized protein. (192 aa)
	ASZ78_008648	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	ASZ78_000408	S10_plectin domain-containing protein. (166 aa)
	ASZ78_010028	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (146 aa)
	ASZ78_000445	Uncharacterized protein. (149 aa)
	ASZ78_000397	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (268 aa)
	ASZ78_012844	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	ASZ78_010284	Ribosomal_L2_C domain-containing protein. (257 aa)
	ASZ78_000446	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (93 aa)
	ASZ78_002286	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	ASZ78_002223	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (286 aa)
	ASZ78_002222	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (412 aa)
	ASZ78_002287	Uncharacterized protein. (129 aa)
	ASZ78_012928	Uncharacterized protein. (268 aa)
	ASZ78_009538	Ribosomal_L7Ae domain-containing protein. (266 aa)
	ASZ78_003459	Ribos_L4_asso_C domain-containing protein. (335 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000362	ASZ78_000397	A0A226N738	A0A226NMA7	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.967
ASZ78_000362	ASZ78_000408	A0A226N738	A0A226NLQ7	Uncharacterized protein.	S10_plectin domain-containing protein.	0.996
ASZ78_000362	ASZ78_000445	A0A226N738	A0A226NM89	Uncharacterized protein.	Uncharacterized protein.	0.981
ASZ78_000362	ASZ78_000446	A0A226N738	A0A226NMY5	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.981
ASZ78_000362	ASZ78_000572	A0A226N738	A0A226MPH8	Uncharacterized protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.996
ASZ78_000362	ASZ78_000586	A0A226N738	A0A226MPG8	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.993
ASZ78_000362	ASZ78_001668	A0A226N738	A0A226N970	Uncharacterized protein.	Uncharacterized protein.	0.979
ASZ78_000362	ASZ78_001770	A0A226N738	A0A226MM50	Uncharacterized protein.	KxDL domain-containing protein.	0.509
ASZ78_000362	ASZ78_001800	A0A226N738	A0A226NCB8	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.996
ASZ78_000362	ASZ78_002222	A0A226N738	A0A226NN80	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.972
ASZ78_000362	ASZ78_002223	A0A226N738	A0A226NN21	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.995
ASZ78_000362	ASZ78_002286	A0A226N738	A0A226NMZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.976
ASZ78_000362	ASZ78_002287	A0A226N738	A0A226NN94	Uncharacterized protein.	Uncharacterized protein.	0.976
ASZ78_000362	ASZ78_002541	A0A226N738	A0A226M7S0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.981
ASZ78_000362	ASZ78_003056	A0A226N738	A0A226M712	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein.	0.977
ASZ78_000362	ASZ78_003459	A0A226N738	A0A226NNW6	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.994
ASZ78_000362	ASZ78_003906	A0A226N738	A0A226MS06	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.995
ASZ78_000362	ASZ78_004299	A0A226N738	A0A226MK12	Uncharacterized protein.	W2 domain-containing protein.	0.924
ASZ78_000362	ASZ78_004457	A0A226N738	A0A226N1E8	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.995
ASZ78_000362	ASZ78_004511	A0A226N738	A0A226MWE1	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.995