(93 nodes) RHOG GTPase cycle network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_006966	Uncharacterized protein. (77 aa)
	ASZ78_006824	Uncharacterized protein. (704 aa)
	ASZ78_006826	CRAL-TRIO domain-containing protein. (409 aa)
	ASZ78_006823	Uncharacterized protein. (93 aa)
	ASZ78_013453	LEM domain-containing protein. (944 aa)
	ASZ78_012779	Uncharacterized protein. (207 aa)
	ASZ78_009991	Uncharacterized protein. (973 aa)
	ASZ78_006228	Uncharacterized protein. (568 aa)
	ASZ78_006229	Uncharacterized protein. (360 aa)
	ASZ78_001562	Non-specific serine/threonine protein kinase. (525 aa)
	ASZ78_005278	Uncharacterized protein. (200 aa)
	ASZ78_004247	Ras-GAP domain-containing protein. (1032 aa)
	ASZ78_010245	Mitogen-activated protein kinase kinase kinase. (1027 aa)
	ASZ78_006795	LEM domain-containing protein. (519 aa)
	ASZ78_015267	Tudor domain-containing protein. (608 aa)
	ASZ78_005335	Vang-like protein. (535 aa)
	ASZ78_014286	Uncharacterized protein. (1681 aa)
	ASZ78_009527	Uncharacterized protein. (746 aa)
	ASZ78_009823	Uncharacterized protein. (591 aa)
	ASZ78_011134	Uncharacterized protein. (1133 aa)
	ASZ78_011133	Uncharacterized protein. (365 aa)
	ASZ78_010326	Uncharacterized protein; Belongs to the DOCK family. (1754 aa)
	ASZ78_002531	Uncharacterized protein; Belongs to the DOCK family. (1789 aa)
	ASZ78_011419	Uncharacterized protein. (436 aa)
	ASZ78_005928	Protein kinase domain-containing protein. (365 aa)
	ASZ78_012539	Uncharacterized protein. (777 aa)
	ASZ78_002139	DHR-2 domain-containing protein; Belongs to the DOCK family. (786 aa)
	ASZ78_006725	Uncharacterized protein. (228 aa)
	ASZ78_016587	CBM20 domain-containing protein. (357 aa)
	ASZ78_000822	Uncharacterized protein. (191 aa)
	ASZ78_003283	Uncharacterized protein; Belongs to the synaptobrevin family. (198 aa)
	ASZ78_016643	Uncharacterized protein. (191 aa)
	ASZ78_011760	Uncharacterized protein. (567 aa)
	ASZ78_014778	Uncharacterized protein. (814 aa)
	ASZ78_015186	Uncharacterized protein. (1691 aa)
	ASZ78_012761	Uncharacterized protein. (169 aa)
	ASZ78_012757	Uncharacterized protein. (1494 aa)
	ASZ78_006982	Rho-GAP domain-containing protein. (86 aa)
	ASZ78_004311	Rho-GAP domain-containing protein. (168 aa)
	ASZ78_012808	V-SNARE coiled-coil homology domain-containing protein. (70 aa)
	ASZ78_000333	Uncharacterized protein. (140 aa)
	ASZ78_004955	Uncharacterized protein. (1325 aa)
	ASZ78_004959	SH3 domain-containing protein. (270 aa)
	ASZ78_004957	Uncharacterized protein. (379 aa)
	ASZ78_004413	Uncharacterized protein. (586 aa)
	ASZ78_001540	Uncharacterized protein. (1291 aa)
	ASZ78_001541	Rho-GAP domain-containing protein. (144 aa)
	ASZ78_009507	Phospholipase. (1009 aa)
	ASZ78_009245	Uncharacterized protein. (317 aa)
	ASZ78_012366	Uncharacterized protein. (1014 aa)
	ASZ78_012367	Uncharacterized protein. (411 aa)
	ASZ78_008506	Uncharacterized protein. (126 aa)
	ASZ78_011445	Uncharacterized protein. (929 aa)
	ASZ78_011444	Uncharacterized protein. (1256 aa)
	ASZ78_002368	Uncharacterized protein; Belongs to the GroES chaperonin family. (102 aa)
	ASZ78_014034	Guanylate kinase-like domain-containing protein. (258 aa)
	ASZ78_010177	Uncharacterized protein. (1041 aa)
	ASZ78_010576	ELMO domain-containing protein. (693 aa)
	ASZ78_007748	Uncharacterized protein. (453 aa)
	ASZ78_009481	Uncharacterized protein. (136 aa)
	ASZ78_009362	Uncharacterized protein. (1234 aa)
	ASZ78_013963	Uncharacterized protein. (970 aa)
	ASZ78_009855	Rho-GAP domain-containing protein. (1652 aa)
	ASZ78_007450	Protein kinase domain-containing protein. (325 aa)
	ASZ78_006688	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (168 aa)
	ASZ78_011861	MSP domain-containing protein. (243 aa)
	ASZ78_004993	V-SNARE coiled-coil homology domain-containing protein. (66 aa)
	ASZ78_014900	Uncharacterized protein. (769 aa)
	ASZ78_008423	Rho-GAP domain-containing protein. (587 aa)
	ASZ78_001185	Uncharacterized protein. (980 aa)
	ASZ78_014526	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family. (235 aa)
	ASZ78_016826	L-type lectin-like domain-containing protein. (456 aa)
	ASZ78_006094	Uncharacterized protein. (166 aa)
	ASZ78_016545	DH domain-containing protein. (208 aa)
	ASZ78_016542	CRAL-TRIO domain-containing protein. (551 aa)
	ASZ78_016546	Uncharacterized protein. (211 aa)
	ASZ78_009415	Protein kinase domain-containing protein. (755 aa)
	ASZ78_015020	Uncharacterized protein. (1739 aa)
	ASZ78_014432	CRIB domain-containing protein. (411 aa)
	ASZ78_016547	Uncharacterized protein. (94 aa)
	ASZ78_013675	Uncharacterized protein. (204 aa)
	ASZ78_004743	DHR-2 domain-containing protein; Belongs to the DOCK family. (904 aa)
	ASZ78_004744	DHR-1 domain-containing protein; Belongs to the DOCK family. (745 aa)
	ASZ78_004068	DUF4745 domain-containing protein. (1058 aa)
	ASZ78_014868	Uncharacterized protein. (322 aa)
	ASZ78_014867	Uncharacterized protein; Belongs to the DOCK family. (1191 aa)
	ASZ78_014866	SH3 domain-containing protein. (221 aa)
	ASZ78_013801	Uncharacterized protein. (135 aa)
	ASZ78_006479	Uncharacterized protein. (801 aa)
	ASZ78_014962	Uncharacterized protein; Belongs to the DOCK family. (944 aa)
	ASZ78_000380	Uncharacterized protein. (720 aa)
	ASZ78_014961	DHR-2 domain-containing protein; Belongs to the DOCK family. (861 aa)
	ASZ78_015659	Uncharacterized protein. (759 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000333	ASZ78_000822	A0A226M730	A0A226MF06	Uncharacterized protein.	Uncharacterized protein.	0.770
ASZ78_000333	ASZ78_006094	A0A226M730	A0A226MZN6	Uncharacterized protein.	Uncharacterized protein.	0.889
ASZ78_000333	ASZ78_016643	A0A226M730	A0A226MDG2	Uncharacterized protein.	Uncharacterized protein.	0.770
ASZ78_000380	ASZ78_000822	A0A226N6M0	A0A226MF06	Uncharacterized protein.	Uncharacterized protein.	0.936
ASZ78_000380	ASZ78_006094	A0A226N6M0	A0A226MZN6	Uncharacterized protein.	Uncharacterized protein.	0.716
ASZ78_000380	ASZ78_009991	A0A226N6M0	A0A226NA81	Uncharacterized protein.	Uncharacterized protein.	0.607
ASZ78_000380	ASZ78_016643	A0A226N6M0	A0A226MDG2	Uncharacterized protein.	Uncharacterized protein.	0.940
ASZ78_000822	ASZ78_000333	A0A226MF06	A0A226M730	Uncharacterized protein.	Uncharacterized protein.	0.770
ASZ78_000822	ASZ78_000380	A0A226MF06	A0A226N6M0	Uncharacterized protein.	Uncharacterized protein.	0.936
ASZ78_000822	ASZ78_001185	A0A226MF06	A0A226MY09	Uncharacterized protein.	Uncharacterized protein.	0.682
ASZ78_000822	ASZ78_001540	A0A226MF06	A0A226NER6	Uncharacterized protein.	Uncharacterized protein.	0.604
ASZ78_000822	ASZ78_001541	A0A226MF06	A0A226NER8	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.604
ASZ78_000822	ASZ78_001562	A0A226MF06	A0A226NCC4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.814
ASZ78_000822	ASZ78_002139	A0A226MF06	A0A226MFX2	Uncharacterized protein.	DHR-2 domain-containing protein; Belongs to the DOCK family.	0.758
ASZ78_000822	ASZ78_002368	A0A226MF06	A0A226MPL3	Uncharacterized protein.	Uncharacterized protein; Belongs to the GroES chaperonin family.	0.630
ASZ78_000822	ASZ78_002531	A0A226MF06	A0A226MLH0	Uncharacterized protein.	Uncharacterized protein; Belongs to the DOCK family.	0.758
ASZ78_000822	ASZ78_003283	A0A226MF06	A0A226MEP1	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.631
ASZ78_000822	ASZ78_004068	A0A226MF06	A0A226N2H7	Uncharacterized protein.	DUF4745 domain-containing protein.	0.615
ASZ78_000822	ASZ78_004247	A0A226MF06	A0A226NFT5	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.713
ASZ78_000822	ASZ78_004311	A0A226MF06	A0A226M8I5	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.555