(23 nodes) RHOJ GTPase cycle network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_001784	Uncharacterized protein. (731 aa)
	ASZ78_001541	Rho-GAP domain-containing protein. (144 aa)
	ASZ78_001540	Uncharacterized protein. (1291 aa)
	ASZ78_004957	Uncharacterized protein. (379 aa)
	ASZ78_004959	SH3 domain-containing protein. (270 aa)
	ASZ78_004955	Uncharacterized protein. (1325 aa)
	ASZ78_008991	WH2 domain-containing protein. (105 aa)
	ASZ78_015659	Uncharacterized protein. (759 aa)
	ASZ78_006479	Uncharacterized protein. (801 aa)
	ASZ78_015020	Uncharacterized protein. (1739 aa)
	ASZ78_008423	Rho-GAP domain-containing protein. (587 aa)
	ASZ78_009855	Rho-GAP domain-containing protein. (1652 aa)
	ASZ78_013963	Uncharacterized protein. (970 aa)
	ASZ78_009481	Uncharacterized protein. (136 aa)
	ASZ78_007748	Uncharacterized protein. (453 aa)
	ASZ78_000552	Rho-GAP domain-containing protein. (911 aa)
	ASZ78_008506	Uncharacterized protein. (126 aa)
	ASZ78_009720	Uncharacterized protein. (246 aa)
	ASZ78_001341	Uncharacterized protein. (723 aa)
	ASZ78_008191	Uncharacterized protein; Belongs to the DOCK family. (1780 aa)
	ASZ78_012757	Uncharacterized protein. (1494 aa)
	ASZ78_000232	Rho-GAP domain-containing protein. (820 aa)
	ASZ78_004311	Rho-GAP domain-containing protein. (168 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000232	ASZ78_009720	A0A226MCI9	A0A226MLH2	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.553
ASZ78_000552	ASZ78_001784	A0A226MPF9	A0A226MM37	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.918
ASZ78_000552	ASZ78_009720	A0A226MPF9	A0A226MLH2	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.508
ASZ78_000552	ASZ78_015659	A0A226MPF9	A0A226N6Y2	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.918
ASZ78_001341	ASZ78_009720	A0A226MKI3	A0A226MLH2	Uncharacterized protein.	Uncharacterized protein.	0.497
ASZ78_001540	ASZ78_001541	A0A226NER6	A0A226NER8	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.899
ASZ78_001540	ASZ78_009720	A0A226NER6	A0A226MLH2	Uncharacterized protein.	Uncharacterized protein.	0.598
ASZ78_001540	ASZ78_012757	A0A226NER6	A0A226MCS1	Uncharacterized protein.	Uncharacterized protein.	0.707
ASZ78_001541	ASZ78_001540	A0A226NER8	A0A226NER6	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.899
ASZ78_001541	ASZ78_009720	A0A226NER8	A0A226MLH2	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.598
ASZ78_001784	ASZ78_000552	A0A226MM37	A0A226MPF9	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.918
ASZ78_001784	ASZ78_009720	A0A226MM37	A0A226MLH2	Uncharacterized protein.	Uncharacterized protein.	0.541
ASZ78_001784	ASZ78_015659	A0A226MM37	A0A226N6Y2	Uncharacterized protein.	Uncharacterized protein.	0.915
ASZ78_004311	ASZ78_009720	A0A226M8I5	A0A226MLH2	Rho-GAP domain-containing protein.	Uncharacterized protein.	0.515
ASZ78_004955	ASZ78_004957	A0A226NCF5	A0A226ND33	Uncharacterized protein.	Uncharacterized protein.	0.830
ASZ78_004955	ASZ78_004959	A0A226NCF5	A0A226NCH1	Uncharacterized protein.	SH3 domain-containing protein.	0.890
ASZ78_004955	ASZ78_009720	A0A226NCF5	A0A226MLH2	Uncharacterized protein.	Uncharacterized protein.	0.766
ASZ78_004957	ASZ78_004955	A0A226ND33	A0A226NCF5	Uncharacterized protein.	Uncharacterized protein.	0.830
ASZ78_004957	ASZ78_004959	A0A226ND33	A0A226NCH1	Uncharacterized protein.	SH3 domain-containing protein.	0.907
ASZ78_004957	ASZ78_009720	A0A226ND33	A0A226MLH2	Uncharacterized protein.	Uncharacterized protein.	0.766