(13 nodes) Biosynthesis of maresins network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_001435	Uncharacterized protein. (124 aa)
	ASZ78_007600	Uncharacterized protein; Belongs to the cytochrome P450 family. (67 aa)
	ASZ78_001199	Uncharacterized protein; Belongs to the cytochrome P450 family. (255 aa)
	ASZ78_001702	Uncharacterized protein. (194 aa)
	ASZ78_010199	Uncharacterized protein. (143 aa)
	ASZ78_000590	Uncharacterized protein; Belongs to the cytochrome P450 family. (526 aa)
	ASZ78_000589	Uncharacterized protein; Belongs to the cytochrome P450 family. (505 aa)
	ASZ78_003901	AB hydrolase-1 domain-containing protein. (289 aa)
	ASZ78_003900	BTB domain-containing protein. (1534 aa)
	ASZ78_007704	AB hydrolase-1 domain-containing protein. (279 aa)
	ASZ78_011980	Uncharacterized protein. (674 aa)
	ASZ78_004675	Uncharacterized protein; Belongs to the cytochrome P450 family. (563 aa)
	ASZ78_004676	Uncharacterized protein. (501 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000589	ASZ78_001435	A0A226MPE6	A0A226MZ94	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.749
ASZ78_000589	ASZ78_004675	A0A226MPE6	A0A226NJL0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.672
ASZ78_000589	ASZ78_004676	A0A226MPE6	A0A226NJQ1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.671
ASZ78_000589	ASZ78_011980	A0A226MPE6	A0A226N1L5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.555
ASZ78_000590	ASZ78_001435	A0A226MP39	A0A226MZ94	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.749
ASZ78_000590	ASZ78_004675	A0A226MP39	A0A226NJL0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.673
ASZ78_000590	ASZ78_004676	A0A226MP39	A0A226NJQ1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.670
ASZ78_000590	ASZ78_011980	A0A226MP39	A0A226N1L5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.555
ASZ78_001199	ASZ78_001435	A0A226M8Q0	A0A226MZ94	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.749
ASZ78_001199	ASZ78_004675	A0A226M8Q0	A0A226NJL0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.650
ASZ78_001199	ASZ78_004676	A0A226M8Q0	A0A226NJQ1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.651
ASZ78_001199	ASZ78_011980	A0A226M8Q0	A0A226N1L5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.555
ASZ78_001435	ASZ78_000589	A0A226MZ94	A0A226MPE6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.749
ASZ78_001435	ASZ78_000590	A0A226MZ94	A0A226MP39	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.749
ASZ78_001435	ASZ78_001199	A0A226MZ94	A0A226M8Q0	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.749
ASZ78_001435	ASZ78_001702	A0A226MZ94	A0A226MA85	Uncharacterized protein.	Uncharacterized protein.	0.749
ASZ78_001435	ASZ78_003900	A0A226MZ94	A0A226MRM9	Uncharacterized protein.	BTB domain-containing protein.	0.561
ASZ78_001435	ASZ78_003901	A0A226MZ94	A0A226MRH6	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.561
ASZ78_001435	ASZ78_004675	A0A226MZ94	A0A226NJL0	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.635
ASZ78_001435	ASZ78_004676	A0A226MZ94	A0A226NJQ1	Uncharacterized protein.	Uncharacterized protein.	0.635