(11 nodes) Caspase recruitment domain network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_004681	CARD domain-containing protein. (1070 aa)
	ASZ78_011374	Uncharacterized protein. (930 aa)
	ASZ78_004872	Uncharacterized protein. (434 aa)
	ASZ78_013736	CARD domain-containing protein. (223 aa)
	ASZ78_014953	Uncharacterized protein; Belongs to the peptidase C14A family. (371 aa)
	ASZ78_011545	Uncharacterized protein. (922 aa)
	ASZ78_000954	Uncharacterized protein. (1120 aa)
	ASZ78_014441	CARD domain-containing protein. (846 aa)
	ASZ78_016009	Uncharacterized protein. (752 aa)
	ASZ78_016976	CARD domain-containing protein. (154 aa)
	ASZ78_005689	CARD domain-containing protein. (530 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000954	ASZ78_004872	A0A226MXR7	A0A226NPV5	Uncharacterized protein.	Uncharacterized protein.	0.774
ASZ78_000954	ASZ78_011545	A0A226MXR7	A0A226MU68	Uncharacterized protein.	Uncharacterized protein.	0.518
ASZ78_004681	ASZ78_004872	A0A226NIR8	A0A226NPV5	CARD domain-containing protein.	Uncharacterized protein.	0.643
ASZ78_004681	ASZ78_013736	A0A226NIR8	A0A226N6Q8	CARD domain-containing protein.	CARD domain-containing protein.	0.992
ASZ78_004681	ASZ78_014441	A0A226NIR8	A0A226N0W9	CARD domain-containing protein.	CARD domain-containing protein.	0.820
ASZ78_004872	ASZ78_000954	A0A226NPV5	A0A226MXR7	Uncharacterized protein.	Uncharacterized protein.	0.774
ASZ78_004872	ASZ78_004681	A0A226NPV5	A0A226NIR8	Uncharacterized protein.	CARD domain-containing protein.	0.643
ASZ78_004872	ASZ78_005689	A0A226NPV5	A0A226NHI2	Uncharacterized protein.	CARD domain-containing protein.	0.930
ASZ78_004872	ASZ78_011545	A0A226NPV5	A0A226MU68	Uncharacterized protein.	Uncharacterized protein.	0.999
ASZ78_004872	ASZ78_013736	A0A226NPV5	A0A226N6Q8	Uncharacterized protein.	CARD domain-containing protein.	0.652
ASZ78_004872	ASZ78_014953	A0A226NPV5	A0A226MCV6	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.484
ASZ78_005689	ASZ78_004872	A0A226NHI2	A0A226NPV5	CARD domain-containing protein.	Uncharacterized protein.	0.930
ASZ78_005689	ASZ78_011545	A0A226NHI2	A0A226MU68	CARD domain-containing protein.	Uncharacterized protein.	0.680
ASZ78_005689	ASZ78_013736	A0A226NHI2	A0A226N6Q8	CARD domain-containing protein.	CARD domain-containing protein.	0.969
ASZ78_005689	ASZ78_014953	A0A226NHI2	A0A226MCV6	CARD domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.605
ASZ78_011374	ASZ78_011545	A0A226NP86	A0A226MU68	Uncharacterized protein.	Uncharacterized protein.	0.480
ASZ78_011545	ASZ78_000954	A0A226MU68	A0A226MXR7	Uncharacterized protein.	Uncharacterized protein.	0.518
ASZ78_011545	ASZ78_004872	A0A226MU68	A0A226NPV5	Uncharacterized protein.	Uncharacterized protein.	0.999
ASZ78_011545	ASZ78_005689	A0A226MU68	A0A226NHI2	Uncharacterized protein.	CARD domain-containing protein.	0.680
ASZ78_011545	ASZ78_011374	A0A226MU68	A0A226NP86	Uncharacterized protein.	Uncharacterized protein.	0.480