(16 nodes) Primary bile acid biosynthesis network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014769	Uncharacterized protein. (693 aa)
	ASZ78_010562	Uncharacterized protein. (335 aa)
	ASZ78_015103	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (274 aa)
	ASZ78_010118	Uncharacterized protein. (444 aa)
	ASZ78_001388	Uncharacterized protein; Belongs to the cytochrome P450 family. (394 aa)
	ASZ78_002463	Uncharacterized protein. (180 aa)
	ASZ78_016047	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (490 aa)
	ASZ78_016277	Uncharacterized protein; Belongs to the 3-beta-HSD family. (331 aa)
	ASZ78_007594	Uncharacterized protein; Belongs to the cytochrome P450 family. (506 aa)
	ASZ78_001835	Uncharacterized protein; Belongs to the cytochrome P450 family. (510 aa)
	ASZ78_000645	Uncharacterized protein. (521 aa)
	ASZ78_013108	Uncharacterized protein. (394 aa)
	ASZ78_005704	Uncharacterized protein; Belongs to the cytochrome P450 family. (603 aa)
	ASZ78_011324	Uncharacterized protein; Belongs to the cytochrome P450 family. (529 aa)
	ASZ78_015742	Aldo_ket_red domain-containing protein. (313 aa)
	ASZ78_003867	Uncharacterized protein; Belongs to the cytochrome P450 family. (266 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000645	ASZ78_001388	A0A226NFP9	A0A226MF39	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.419
ASZ78_000645	ASZ78_001835	A0A226NFP9	A0A226NDC8	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.608
ASZ78_000645	ASZ78_002463	A0A226NFP9	A0A226MCC9	Uncharacterized protein.	Uncharacterized protein.	0.417
ASZ78_000645	ASZ78_003867	A0A226NFP9	A0A226N5F7	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.417
ASZ78_000645	ASZ78_005704	A0A226NFP9	A0A226NHP0	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.469
ASZ78_000645	ASZ78_007594	A0A226NFP9	A0A226N7F6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.436
ASZ78_000645	ASZ78_010118	A0A226NFP9	A0A226MQ22	Uncharacterized protein.	Uncharacterized protein.	0.456
ASZ78_000645	ASZ78_010562	A0A226NFP9	A0A226MR39	Uncharacterized protein.	Uncharacterized protein.	0.632
ASZ78_000645	ASZ78_011324	A0A226NFP9	A0A226NP36	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.446
ASZ78_000645	ASZ78_013108	A0A226NFP9	A0A226NH30	Uncharacterized protein.	Uncharacterized protein.	0.955
ASZ78_000645	ASZ78_014769	A0A226NFP9	A0A226MRP9	Uncharacterized protein.	Uncharacterized protein.	0.966
ASZ78_000645	ASZ78_016047	A0A226NFP9	A0A226NAH0	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.977
ASZ78_000645	ASZ78_016277	A0A226NFP9	A0A226NBZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the 3-beta-HSD family.	0.559
ASZ78_001388	ASZ78_000645	A0A226MF39	A0A226NFP9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.419
ASZ78_001388	ASZ78_001835	A0A226MF39	A0A226NDC8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.726
ASZ78_001388	ASZ78_002463	A0A226MF39	A0A226MCC9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.950
ASZ78_001388	ASZ78_003867	A0A226MF39	A0A226N5F7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.935
ASZ78_001388	ASZ78_011324	A0A226MF39	A0A226NP36	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.799
ASZ78_001388	ASZ78_015103	A0A226MF39	A0A226MFN0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.938
ASZ78_001388	ASZ78_015742	A0A226MF39	A0A226NPN5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Aldo_ket_red domain-containing protein.	0.501