(40 nodes) Intestinal immune network for IgA production network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_002442	Ig-like domain-containing protein. (227 aa)
	ASZ78_001527	Ig-like domain-containing protein. (166 aa)
	ASZ78_003157	MHC_II_beta domain-containing protein. (138 aa)
	ASZ78_002615	Ig-like domain-containing protein. (142 aa)
	ASZ78_005761	Ig-like domain-containing protein. (264 aa)
	ASZ78_005759	Ig-like domain-containing protein. (305 aa)
	ASZ78_004767	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (271 aa)
	ASZ78_016609	Uncharacterized protein. (104 aa)
	ASZ78_016608	DUF1968 domain-containing protein. (181 aa)
	ASZ78_009166	IGv domain-containing protein. (221 aa)
	ASZ78_004092	SCY domain-containing protein; Belongs to the intercrine alpha (chemokine CxC) family. (89 aa)
	ASZ78_003488	Ig-like domain-containing protein. (121 aa)
	ASZ78_005822	Uncharacterized protein. (155 aa)
	ASZ78_014066	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (353 aa)
	ASZ78_001633	Uncharacterized protein. (604 aa)
	ASZ78_014240	Ig-like domain-containing protein. (172 aa)
	ASZ78_002858	Integrin beta. (411 aa)
	ASZ78_002119	CMP/dCMP-type deaminase domain-containing protein. (202 aa)
	ASZ78_013766	Interleukin; Belongs to the IL-15/IL-21 family. (189 aa)
	ASZ78_003935	Protein kinase domain-containing protein. (714 aa)
	ASZ78_008298	Uncharacterized protein. (280 aa)
	ASZ78_000596	BaffR-Tall_bind domain-containing protein. (213 aa)
	ASZ78_000510	Uncharacterized protein. (174 aa)
	ASZ78_010566	Uncharacterized protein. (291 aa)
	ASZ78_009482	Ig-like domain-containing protein. (148 aa)
	ASZ78_007714	Sushi domain-containing protein. (138 aa)
	ASZ78_009695	Ig-like domain-containing protein. (265 aa)
	ASZ78_002360	Ig-like domain-containing protein. (198 aa)
	ASZ78_000797	Uncharacterized protein. (251 aa)
	ASZ78_006315	Uncharacterized protein. (445 aa)
	ASZ78_014168	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (962 aa)
	ASZ78_006872	Interleukin; Belongs to the IL-15/IL-21 family. (170 aa)
	ASZ78_005961	IGv domain-containing protein. (202 aa)
	ASZ78_002701	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (393 aa)
	ASZ78_015797	Uncharacterized protein. (1185 aa)
	ASZ78_015795	Uncharacterized protein. (175 aa)
	ASZ78_002787	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (362 aa)
	ASZ78_006040	CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. (272 aa)
	ASZ78_004647	TACI-CRD2 domain-containing protein. (192 aa)
	ASZ78_007990	Ig-like domain-containing protein. (266 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000510	ASZ78_005822	A0A226MPW7	A0A226MIA9	Uncharacterized protein.	Uncharacterized protein.	0.834
ASZ78_000510	ASZ78_006315	A0A226MPW7	A0A226N278	Uncharacterized protein.	Uncharacterized protein.	0.560
ASZ78_000510	ASZ78_006872	A0A226MPW7	A0A226N5X6	Uncharacterized protein.	Interleukin; Belongs to the IL-15/IL-21 family.	0.408
ASZ78_000510	ASZ78_008298	A0A226MPW7	A0A226MNA1	Uncharacterized protein.	Uncharacterized protein.	0.567
ASZ78_000510	ASZ78_009166	A0A226MPW7	A0A226MGT9	Uncharacterized protein.	IGv domain-containing protein.	0.524
ASZ78_000510	ASZ78_013766	A0A226MPW7	A0A226MMT9	Uncharacterized protein.	Interleukin; Belongs to the IL-15/IL-21 family.	0.884
ASZ78_000510	ASZ78_015795	A0A226MPW7	A0A226NI05	Uncharacterized protein.	Uncharacterized protein.	0.736
ASZ78_000596	ASZ78_003488	A0A226MP14	A0A226MH68	BaffR-Tall_bind domain-containing protein.	Ig-like domain-containing protein.	0.652
ASZ78_000596	ASZ78_003935	A0A226MP14	A0A226MMW6	BaffR-Tall_bind domain-containing protein.	Protein kinase domain-containing protein.	0.702
ASZ78_000596	ASZ78_004647	A0A226MP14	A0A226NJX0	BaffR-Tall_bind domain-containing protein.	TACI-CRD2 domain-containing protein.	0.594
ASZ78_000596	ASZ78_004767	A0A226MP14	A0A226MDW5	BaffR-Tall_bind domain-containing protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.997
ASZ78_000596	ASZ78_006040	A0A226MP14	A0A226NJ30	BaffR-Tall_bind domain-containing protein.	CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.	0.771
ASZ78_000596	ASZ78_010566	A0A226MP14	A0A226MQR1	BaffR-Tall_bind domain-containing protein.	Uncharacterized protein.	0.552
ASZ78_000797	ASZ78_002119	A0A226MYT9	A0A226MLW6	Uncharacterized protein.	CMP/dCMP-type deaminase domain-containing protein.	0.424
ASZ78_000797	ASZ78_002701	A0A226MYT9	A0A226NEH5	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.444
ASZ78_000797	ASZ78_002787	A0A226MYT9	A0A226NJ28	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.551
ASZ78_000797	ASZ78_004767	A0A226MYT9	A0A226MDW5	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.643
ASZ78_000797	ASZ78_005822	A0A226MYT9	A0A226MIA9	Uncharacterized protein.	Uncharacterized protein.	0.768
ASZ78_000797	ASZ78_005961	A0A226MYT9	A0A226NAK7	Uncharacterized protein.	IGv domain-containing protein.	0.748
ASZ78_000797	ASZ78_006040	A0A226MYT9	A0A226NJ30	Uncharacterized protein.	CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.	0.748