(11 nodes) Pertussis network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (293 aa)
	ASZ78_008039	GOLD domain-containing protein. (215 aa)
	ASZ78_014945	GOLD domain-containing protein. (221 aa)
	ASZ78_005920	A2M_recep domain-containing protein. (746 aa)
	ASZ78_006102	C1q domain-containing protein. (243 aa)
	ASZ78_006103	C1q domain-containing protein. (172 aa)
	ASZ78_006101	C1q domain-containing protein. (249 aa)
	ASZ78_000762	Uncharacterized protein; Belongs to the peptidase S1 family. (718 aa)
	ASZ78_012655	SERPIN domain-containing protein; Belongs to the serpin family. (548 aa)
	ASZ78_014455	Uncharacterized protein. (490 aa)
	ASZ78_011580	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (175 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000762	ASZ78_005920	A0A226MYY9	A0A226MCH5	Uncharacterized protein; Belongs to the peptidase S1 family.	A2M_recep domain-containing protein.	0.803
ASZ78_000762	ASZ78_006101	A0A226MYY9	A0A226MZW5	Uncharacterized protein; Belongs to the peptidase S1 family.	C1q domain-containing protein.	0.937
ASZ78_000762	ASZ78_006102	A0A226MYY9	A0A226N0G7	Uncharacterized protein; Belongs to the peptidase S1 family.	C1q domain-containing protein.	0.928
ASZ78_000762	ASZ78_006103	A0A226MYY9	A0A226N077	Uncharacterized protein; Belongs to the peptidase S1 family.	C1q domain-containing protein.	0.906
ASZ78_000762	ASZ78_012655	A0A226MYY9	A0A226MWQ8	Uncharacterized protein; Belongs to the peptidase S1 family.	SERPIN domain-containing protein; Belongs to the serpin family.	0.971
ASZ78_005920	ASZ78_000762	A0A226MCH5	A0A226MYY9	A2M_recep domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.803
ASZ78_005920	ASZ78_006101	A0A226MCH5	A0A226MZW5	A2M_recep domain-containing protein.	C1q domain-containing protein.	0.574
ASZ78_005920	ASZ78_006102	A0A226MCH5	A0A226N0G7	A2M_recep domain-containing protein.	C1q domain-containing protein.	0.601
ASZ78_005920	ASZ78_006103	A0A226MCH5	A0A226N077	A2M_recep domain-containing protein.	C1q domain-containing protein.	0.589
ASZ78_006101	ASZ78_000762	A0A226MZW5	A0A226MYY9	C1q domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.937
ASZ78_006101	ASZ78_005920	A0A226MZW5	A0A226MCH5	C1q domain-containing protein.	A2M_recep domain-containing protein.	0.574
ASZ78_006101	ASZ78_006102	A0A226MZW5	A0A226N0G7	C1q domain-containing protein.	C1q domain-containing protein.	0.999
ASZ78_006101	ASZ78_006103	A0A226MZW5	A0A226N077	C1q domain-containing protein.	C1q domain-containing protein.	0.999
ASZ78_006101	ASZ78_012655	A0A226MZW5	A0A226MWQ8	C1q domain-containing protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.879
ASZ78_006102	ASZ78_000762	A0A226N0G7	A0A226MYY9	C1q domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.928
ASZ78_006102	ASZ78_005920	A0A226N0G7	A0A226MCH5	C1q domain-containing protein.	A2M_recep domain-containing protein.	0.601
ASZ78_006102	ASZ78_006101	A0A226N0G7	A0A226MZW5	C1q domain-containing protein.	C1q domain-containing protein.	0.999
ASZ78_006102	ASZ78_006103	A0A226N0G7	A0A226N077	C1q domain-containing protein.	C1q domain-containing protein.	0.999
ASZ78_006102	ASZ78_012655	A0A226N0G7	A0A226MWQ8	C1q domain-containing protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.924
ASZ78_006103	ASZ78_000762	A0A226N077	A0A226MYY9	C1q domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.906