(32 nodes) Legionellosis network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_007731	Vert_HS_TF domain-containing protein. (132 aa)
	ASZ78_011143	HSF_DOMAIN domain-containing protein. (191 aa)
	ASZ78_012540	HSF_DOMAIN domain-containing protein. (371 aa)
	ASZ78_006401	HSF_DOMAIN domain-containing protein. (371 aa)
	ASZ78_009520	HSF_DOMAIN domain-containing protein. (371 aa)
	ASZ78_004606	HSF_DOMAIN domain-containing protein. (179 aa)
	ASZ78_016906	HSF_DOMAIN domain-containing protein. (275 aa)
	ASZ78_015166	Protein kinase domain-containing protein. (101 aa)
	ASZ78_015167	Uncharacterized protein. (51 aa)
	ASZ78_001903	HSF_DOMAIN domain-containing protein. (274 aa)
	ASZ78_016592	HSF_DOMAIN domain-containing protein. (231 aa)
	ASZ78_001902	HSF_DOMAIN domain-containing protein. (238 aa)
	ASZ78_007730	HSF_DOMAIN domain-containing protein. (99 aa)
	ASZ78_013384	Uncharacterized protein. (225 aa)
	ASZ78_016596	Protein kinase domain-containing protein. (416 aa)
	ASZ78_016455	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (469 aa)
	ASZ78_003203	HSF_DOMAIN domain-containing protein. (532 aa)
	ASZ78_009488	HSF_DOMAIN domain-containing protein. (525 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (293 aa)
	ASZ78_005026	HSF_DOMAIN domain-containing protein. (239 aa)
	ASZ78_007837	Uncharacterized protein. (272 aa)
	ASZ78_000978	Uncharacterized protein. (215 aa)
	ASZ78_001137	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (413 aa)
	ASZ78_002544	Uncharacterized protein. (143 aa)
	ASZ78_002545	HSF_DOMAIN domain-containing protein. (253 aa)
	ASZ78_006473	HSF_DOMAIN domain-containing protein. (476 aa)
	ASZ78_004839	HSF_DOMAIN domain-containing protein. (401 aa)
	ASZ78_004833	HSF_DOMAIN domain-containing protein. (400 aa)
	GUF1	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (598 aa)
	ASZ78_009970	OTU domain-containing protein. (390 aa)
	ASZ78_016309	Uncharacterized protein. (496 aa)
	ASZ78_011580	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (175 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001902	ASZ78_002545	A0A226MDV9	A0A226N1G8	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.418
ASZ78_002545	ASZ78_001902	A0A226N1G8	A0A226MDV9	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.418
ASZ78_003203	ASZ78_006473	A0A226MLG6	A0A226N512	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.612
ASZ78_003203	ASZ78_007730	A0A226MLG6	A0A226MGD7	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.590
ASZ78_003203	ASZ78_007731	A0A226MLG6	A0A226MFU2	HSF_DOMAIN domain-containing protein.	Vert_HS_TF domain-containing protein.	0.591
ASZ78_003203	ASZ78_009488	A0A226MLG6	A0A226MRJ4	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.756
ASZ78_006473	ASZ78_003203	A0A226N512	A0A226MLG6	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.612
ASZ78_006473	ASZ78_013384	A0A226N512	A0A226MHP3	HSF_DOMAIN domain-containing protein.	Uncharacterized protein.	0.566
ASZ78_007730	ASZ78_003203	A0A226MGD7	A0A226MLG6	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.590
ASZ78_007730	ASZ78_007731	A0A226MGD7	A0A226MFU2	HSF_DOMAIN domain-containing protein.	Vert_HS_TF domain-containing protein.	0.899
ASZ78_007731	ASZ78_003203	A0A226MFU2	A0A226MLG6	Vert_HS_TF domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.591
ASZ78_007731	ASZ78_007730	A0A226MFU2	A0A226MGD7	Vert_HS_TF domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.899
ASZ78_009488	ASZ78_003203	A0A226MRJ4	A0A226MLG6	HSF_DOMAIN domain-containing protein.	HSF_DOMAIN domain-containing protein.	0.756
ASZ78_013384	ASZ78_006473	A0A226MHP3	A0A226N512	Uncharacterized protein.	HSF_DOMAIN domain-containing protein.	0.566