(14 nodes) Cell-cell signaling network (Absidia repens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1X2I4X9	TATA element modulatory factor 1 TATA binding-domain-containing protein. (1039 aa)
	A0A1X2I5R2	Periplasmic binding protein-like I; Belongs to the G-protein coupled receptor 3 family. (1045 aa)
	A0A1X2IBY4	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (569 aa)
	A0A1X2IDI8	Uncharacterized protein. (108 aa)
	A0A1X2IFY2	7 transmembrane sweet-taste receptor of 3 GCPR-domain-containing protein. (765 aa)
	A0A1X2IKZ0	Periplasmic binding protein-like I. (348 aa)
	A0A1X2IMH9	G_PROTEIN_RECEP_F3_4 domain-containing protein. (144 aa)
	A0A1X2IMR3	Uncharacterized protein. (447 aa)
	A0A1X2IMT7	Uncharacterized protein. (384 aa)
	A0A1X2IV80	Uncharacterized protein. (502 aa)
	A0A1X2IWN1	Periplasmic binding protein-like I; Belongs to the G-protein coupled receptor 3 family. (1014 aa)
	A0A1X2J0R6	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (501 aa)
	A0A1X2J203	Uncharacterized protein. (217 aa)
	A0A1X2HZQ8	Uncharacterized protein. (472 aa)

Your Current Organism:

Absidia repens

NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X2HZQ8	A0A1X2IMR3	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2HZQ8	A0A1X2IV80	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IKZ0	A0A1X2IMH9	Periplasmic binding protein-like I.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.436
A0A1X2IMH9	A0A1X2IKZ0	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Periplasmic binding protein-like I.	0.436
A0A1X2IMR3	A0A1X2HZQ8	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IMR3	A0A1X2IMT7	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IMR3	A0A1X2IV80	Uncharacterized protein.	Uncharacterized protein.	0.875
A0A1X2IMR3	A0A1X2J203	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A1X2IMT7	A0A1X2IMR3	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IMT7	A0A1X2IV80	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IV80	A0A1X2HZQ8	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IV80	A0A1X2IMR3	Uncharacterized protein.	Uncharacterized protein.	0.875
A0A1X2IV80	A0A1X2IMT7	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A1X2IV80	A0A1X2J203	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A1X2J203	A0A1X2IMR3	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A1X2J203	A0A1X2IV80	Uncharacterized protein.	Uncharacterized protein.	0.976