(69 nodes) Mismatch repair network (Absidia repens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1X2HZ85	Uncharacterized protein. (827 aa)
	A0A1X2J2U5	Cut8 six-helix bundle-domain-containing protein. (316 aa)
	A0A1X2J201	Nicotianamine synthase protein-domain-containing protein. (450 aa)
	A0A1X2J1K6	Uncharacterized protein. (141 aa)
	A0A1X2J1F2	Zds_C domain-containing protein. (478 aa)
	A0A1X2J188	Uncharacterized protein. (236 aa)
	A0A1X2J110	Uncharacterized protein. (356 aa)
	A0A1X2J0C5	Muts domain V-domain-containing protein. (966 aa)
	A0A1X2J047	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (550 aa)
	A0A1X2IZD2	Uncharacterized protein. (560 aa)
	A0A1X2IZ27	Replication factor C subunit 1. (822 aa)
	A0A1X2IYI4	CCHC-type domain-containing protein. (662 aa)
	A0A1X2IXZ5	Uncharacterized protein. (596 aa)
	A0A1X2IXV8	Uncharacterized protein. (161 aa)
	A0A1X2IXH1	Muts domain V-domain-containing protein. (906 aa)
	A0A1X2IWF6	Retrotrans_gag domain-containing protein. (844 aa)
	A0A1X2IW26	DNA polymerase subunit Cdc27. (409 aa)
	A0A1X2IVI0	P-loop containing nucleoside triphosphate hydrolase protein. (656 aa)
	A0A1X2IU24	Uncharacterized protein. (533 aa)
	A0A1X2ITM2	Uncharacterized protein. (342 aa)
	A0A1X2ITK4	PIN domain-like protein. (466 aa)
	A0A1X2ITE5	DNA clamp loader. (346 aa)
	A0A1X2ISB1	Uncharacterized protein. (239 aa)
	A0A1X2IS70	Zds_C domain-containing protein. (835 aa)
	A0A1X2IRW8	CCHC-type domain-containing protein. (599 aa)
	A0A1X2IQX6	VPS4-associated protein 1. (216 aa)
	A0A1X2IQQ7	Zds_C domain-containing protein. (721 aa)
	A0A1X2IQB0	Uncharacterized protein. (335 aa)
	A0A1X2IQ92	P-loop containing nucleoside triphosphate hydrolase protein. (544 aa)
	A0A1X2IQ40	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (258 aa)
	A0A1X2IP37	Uncharacterized protein. (310 aa)
	A0A1X2INW3	Replication factor RFC1 C terminal domain-domain-containing protein. (676 aa)
	A0A1X2IM61	CWC16 protein. (333 aa)
	A0A1X2IM42	P-loop containing nucleoside triphosphate hydrolase protein. (350 aa)
	A0A1X2IK10	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
	A0A1X2IJ30	Ribonuclease H-like domain-containing protein. (312 aa)
	A0A1X2IIW6	GAR domain-containing protein. (905 aa)
	A0A1X2IIT7	GAR domain-containing protein. (821 aa)
	A0A1X2IIS7	Putative MSH2 protein; Component of the post-replicative DNA mismatch repair system (MMR). (942 aa)
	A0A1X2IIJ5	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (593 aa)
	A0A1X2IFR9	DNA mismatch repair protein MutS. (883 aa)
	A0A1X2IFJ7	Muts domain V-domain-containing protein. (902 aa)
	A0A1X2IES5	Zds_C domain-containing protein. (703 aa)
	A0A1X2IDF4	Uncharacterized protein. (795 aa)
	A0A1X2IC66	Ribonuclease H-like domain-containing protein. (221 aa)
	A0A1X2IAJ3	Uncharacterized protein. (207 aa)
	A0A1X2IAH4	DNA polymerase alpha/epsilon subunit B-domain-containing protein. (472 aa)
	A0A1X2I969	Mysoin-binding motif of peroxisomes-domain-containing protein. (656 aa)
	A0A1X2I960	Mysoin-binding motif of peroxisomes-domain-containing protein. (701 aa)
	A0A1X2I924	Uncharacterized protein. (161 aa)
	A0A1X2I8G0	Uncharacterized protein. (126 aa)
	A0A1X2I865	DNA polymerase delta, subunit 4-domain-containing protein. (145 aa)
	A0A1X2I7F0	P-loop containing nucleoside triphosphate hydrolase protein. (342 aa)
	A0A1X2I745	Uncharacterized protein. (207 aa)
	A0A1X2I6W1	DNA polymerase. (1070 aa)
	A0A1X2I5P9	DNA ligase. (765 aa)
	A0A1X2I593	P-loop containing nucleoside triphosphate hydrolase protein. (340 aa)
	A0A1X2I4N5	Cut8 six-helix bundle-domain-containing protein. (290 aa)
	A0A1X2I4H5	DNA_mis_repair domain-containing protein. (1002 aa)
	A0A1X2I3P3	P-loop containing nucleoside triphosphate hydrolase protein. (697 aa)
	A0A1X2I2T5	P-loop containing nucleoside triphosphate hydrolase protein. (218 aa)
	A0A1X2I2S4	MutL_C domain-containing protein. (734 aa)
	A0A1X2I2Q8	DNA helicase. (408 aa)
	A0A1X2I0U2	MutL-like protein 1, colon cancer, nonpolyposis type 2. (716 aa)
	A0A1X2HZ46	Muts domain V-domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1043 aa)
	A0A1X2HXW0	Uncharacterized protein. (135 aa)
	A0A1X2HWW7	Uncharacterized protein. (145 aa)
	A0A1X2HKX5	Vezatin domain-containing protein. (540 aa)
	A0A1X2HHB4	Replication factor A protein 3. (93 aa)

Your Current Organism:

Absidia repens

NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X2HHB4	A0A1X2IIJ5	Replication factor A protein 3.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.713
A0A1X2HHB4	A0A1X2ISB1	Replication factor A protein 3.	Uncharacterized protein.	0.757
A0A1X2HHB4	A0A1X2ITM2	Replication factor A protein 3.	Uncharacterized protein.	0.669
A0A1X2HHB4	A0A1X2J047	Replication factor A protein 3.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.713
A0A1X2HKX5	A0A1X2HXW0	Vezatin domain-containing protein.	Uncharacterized protein.	0.814
A0A1X2HKX5	A0A1X2HZ46	Vezatin domain-containing protein.	Muts domain V-domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.983
A0A1X2HKX5	A0A1X2I0U2	Vezatin domain-containing protein.	MutL-like protein 1, colon cancer, nonpolyposis type 2.	0.874
A0A1X2HKX5	A0A1X2I2Q8	Vezatin domain-containing protein.	DNA helicase.	0.604
A0A1X2HKX5	A0A1X2I2S4	Vezatin domain-containing protein.	MutL_C domain-containing protein.	0.787
A0A1X2HKX5	A0A1X2I2T5	Vezatin domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.604
A0A1X2HKX5	A0A1X2I3P3	Vezatin domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.604
A0A1X2HKX5	A0A1X2I4H5	Vezatin domain-containing protein.	DNA_mis_repair domain-containing protein.	0.814
A0A1X2HKX5	A0A1X2I4N5	Vezatin domain-containing protein.	Cut8 six-helix bundle-domain-containing protein.	0.753
A0A1X2HKX5	A0A1X2I593	Vezatin domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.983
A0A1X2HKX5	A0A1X2I5P9	Vezatin domain-containing protein.	DNA ligase.	0.984
A0A1X2HKX5	A0A1X2I6W1	Vezatin domain-containing protein.	DNA polymerase.	0.978
A0A1X2HKX5	A0A1X2I7F0	Vezatin domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.975
A0A1X2HKX5	A0A1X2I865	Vezatin domain-containing protein.	DNA polymerase delta, subunit 4-domain-containing protein.	0.503
A0A1X2HKX5	A0A1X2IAH4	Vezatin domain-containing protein.	DNA polymerase alpha/epsilon subunit B-domain-containing protein.	0.976
A0A1X2HKX5	A0A1X2IC66	Vezatin domain-containing protein.	Ribonuclease H-like domain-containing protein.	0.753