STRINGSTRING
COPS2 COPS2 SAMHD1 SAMHD1 COMMD4 COMMD4 CISH CISH SPSB3 SPSB3 COMMD10 COMMD10 FBXL16 FBXL16 KCTD7 KCTD7 UBE4B UBE4B GPS1 GPS1 TRPC4AP TRPC4AP KLHL11 KLHL11 SKP2 SKP2 MREG MREG ASB1 ASB1 FBXL18 FBXL18 DCAF10 DCAF10 WSB1 WSB1 ETV5 ETV5 DCAF12L2 DCAF12L2 SKP1 SKP1 COMMD7 COMMD7 DET1 DET1 NEURL2 NEURL2 KCTD6 KCTD6 KBTBD13 KBTBD13 COPS7B COPS7B COMMD3 COMMD3 DDB2 DDB2 CRBN CRBN COMMD5 COMMD5 COMMD1 COMMD1 FAM45A FAM45A DCAF4L2 DCAF4L2 DCAF5 DCAF5 DTL DTL CAND1 CAND1 LRRC41 LRRC41 ASB5 ASB5 COPS4 COPS4 RBX1 RBX1 CCDC93 CCDC93 COPS7A COPS7A F1NU19_CHICK F1NU19_CHICK RCAN1 RCAN1 ASB11 ASB11 CUL4A CUL4A LOC419074 LOC419074 KLHDC2 KLHDC2 RNF7 RNF7 ARIH2 ARIH2 COMMD8 COMMD8 SENP8 SENP8 VHL VHL TBL2 TBL2 COPS5 COPS5 BTBD6 BTBD6 SPSB4 SPSB4 FBXW11 FBXW11 CUL5 CUL5 KLHL41 KLHL41 CUL1 CUL1 COPS8 COPS8 KLHL3 KLHL3 CUL4B CUL4B DCAF17 DCAF17 COMMD9 COMMD9 USP24 USP24 DDB1 DDB1 NDRG3 NDRG3 NAE1 NAE1 FBXW7 FBXW7 CUL2 CUL2 UBA3 UBA3 DCAF1 DCAF1 FBXO22 FBXO22 FBXO2 FBXO2 GPALPP1 GPALPP1 TCEB1 TCEB1 FBXO4 FBXO4 COMMD2 COMMD2 NEDD8 NEDD8 PPP1R42 PPP1R42 UBE2M UBE2M KLHL20 KLHL20 ENSGALP00000058556 ENSGALP00000058556 KLHDC1 KLHDC1 COPS3 COPS3 UBE2F UBE2F LRR1 LRR1 TRIM63 TRIM63 DCAF11 DCAF11 SPSB1 SPSB1 FBXO31 FBXO31 DCAF6 DCAF6 COMMD6 COMMD6 DDA1 DDA1 ENSGALP00000072290 ENSGALP00000072290 WDTC1 WDTC1 COP1 COP1 ENSGALP00000073564 ENSGALP00000073564 ENSGALP00000073605 ENSGALP00000073605 ZNF385D ZNF385D DCAF8 DCAF8 GPATCH8 GPATCH8 DCUN1D2 DCUN1D2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COPS2PCI domain-containing protein. (443 aa)
SAMHD1Deoxynucleoside triphosphate triphosphohydrolase SAMHD1; Protein that acts both as a host restriction factor involved in defense response to virus and as a regulator of DNA end resection at stalled replication forks. Has deoxynucleoside triphosphate (dNTPase) activity, which is required to restrict infection by viruses: dNTPase activity reduces cellular dNTP levels to levels too low for retroviral reverse transcription to occur, blocking early-stage virus replication in dendritic and other myeloid cells. Functions during S phase at stalled DNA replication forks to promote the resection [...] (614 aa)
COMMD4COMM domain-containing protein. (199 aa)
CISHCytokine-inducible SH2-containing protein; SOCS family proteins form part of a classical negative feedback system that regulates cytokine signal transduction. CIS is involved in the negative regulation of cytokines that signal through the JAK-STAT5 pathway such as erythropoietin, prolactin and interleukin 3 (IL3) receptor. Inhibits STAT5 trans-activation by suppressing its tyrosine phosphorylation. May be a substrate-recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasom [...] (258 aa)
SPSB3SplA/ryanodine receptor domain and SOCS box containing 3. (389 aa)
COMMD10COMM domain-containing protein. (203 aa)
FBXL16Uncharacterized protein. (503 aa)
KCTD7BTB/POZ domain-containing protein KCTD7; May be involved in the control of excitability of cortical neurons. (289 aa)
UBE4BUbiquitination factor E4B. (1346 aa)
GPS1PCI domain-containing protein. (487 aa)
TRPC4APUncharacterized protein. (771 aa)
KLHL11Kelch like family member 11. (689 aa)
SKP2F-box domain-containing protein. (520 aa)
MREGMelanoregulin. (208 aa)
ASB1Ankyrin repeat and SOCS box containing 1. (309 aa)
FBXL18F-box domain-containing protein. (711 aa)
DCAF10DDB1 and CUL4 associated factor 10. (390 aa)
WSB1SOCS box-containing WD protein SWiP-1. (421 aa)
ETV5ETS domain-containing protein. (507 aa)
DCAF12L2DDB1- and CUL4-associated factor 12; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex. (427 aa)
SKP1S-phase kinase-associated protein 1; Essential component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex, which mediates the ubiquitination of proteins involved in cell cycle progression, signal transduction and transcription. In the SCF complex, serves as an adapter that links the F-box protein to CUL1 (By similarity). (163 aa)
COMMD7COMM domain-containing protein. (201 aa)
DET1Uncharacterized protein. (551 aa)
NEURL2Neuralized E3 ubiquitin protein ligase 2. (265 aa)
KCTD6Potassium channel tetramerization domain containing 6. (237 aa)
KBTBD13Kelch repeat and BTB domain containing 13. (452 aa)
COPS7BCOP9 signalosome subunit 7B. (400 aa)
COMMD3COMM domain containing 3. (192 aa)
DDB2DNA damage-binding protein 2; Required for DNA repair. Binds to DDB1 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair. Also appears to function as the substrate recognition module for the DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex DDB1- CUL4-ROC1 (also known as CUL4-DDB-ROC1 and CUL4-DDB-RBX1). The DDB1- CUL4-ROC1 complex may ubiquitinate histone H2A, histone H3 and histone H4 at sites of UV [...] (507 aa)
CRBNProtein cereblon; Substrate recognition component of a DCX (DDB1-CUL4-X-box) E3 protein ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Normal degradation of key regulatory proteins is required for normal limb outgrowth and expression of the fibroblast growth factor FGF8. May also play a role in the assembly and neuronal surface expression of large-conductance calcium-activated potassium channels in brain regions involved in memory and learning. (445 aa)
COMMD5COMM domain-containing protein. (226 aa)
COMMD1Copper metabolism domain containing 1. (215 aa)
FAM45AUDENN domain-containing protein. (397 aa)
DCAF4L2WD_REPEATS_REGION domain-containing protein. (501 aa)
DCAF5DDB1 and CUL4 associated factor 5. (959 aa)
DTLDenticleless protein homolog; Substrate-specific adapter of a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex required for cell cycle control, DNA damage response and translesion DNA synthesis. The DCX(DTL) complex, also named CRL4(CDT2) complex, mediates the polyubiquitination and subsequent degradation of CDT1, CDKN1A/p21(CIP1), KMT5A and SDE2. CDT1 degradation in response to DNA damage is necessary to ensure proper cell cycle regulation of DNA replication. CDKN1A/p21(CIP1) degradation during S phase or following UV irradiation is essential to control replication licensing. [...] (720 aa)
CAND1Cullin associated and neddylation dissociated 1. (1230 aa)
LRRC41Leucine rich repeat containing 41. (791 aa)
ASB5Ankyrin repeat and SOCS box containing 5. (329 aa)
COPS4PCI domain-containing protein. (411 aa)
RBX1RING-type domain-containing protein. (108 aa)
CCDC93Coiled-coil domain-containing protein 93; May be involved in copper-dependent ATP7A trafficking between the trans-Golgi network and vesicles in the cell periphery. Belongs to the CCDC93 family. (617 aa)
COPS7APCI domain-containing protein. (275 aa)
F1NU19_CHICKWD_REPEATS_REGION domain-containing protein. (306 aa)
RCAN1Uncharacterized protein. (194 aa)
ASB11Ankyrin repeat and SOCS box containing 11. (322 aa)
CUL4ACullin 4A; Belongs to the cullin family. (767 aa)
LOC419074Uncharacterized protein. (765 aa)
KLHDC2Uncharacterized protein. (407 aa)
RNF7RING-type domain-containing protein. (114 aa)
ARIH2RBR-type E3 ubiquitin transferase. (490 aa)
COMMD8COMM domain-containing protein. (176 aa)
SENP8ULP_PROTEASE domain-containing protein. (224 aa)
VHLUncharacterized protein. (161 aa)
TBL2Transducin beta like 2. (279 aa)
COPS5MPN domain-containing protein. (337 aa)
BTBD6BTB domain containing 6. (530 aa)
SPSB4SplA/ryanodine receptor domain and SOCS box containing 4. (273 aa)
FBXW11Uncharacterized protein. (531 aa)
CUL5Cullin 5; Belongs to the cullin family. (662 aa)
KLHL41Kelch like family member 41. (606 aa)
CUL1Cullin 1; Belongs to the cullin family. (776 aa)
COPS8PCI domain-containing protein. (230 aa)
KLHL3Kelch like family member 3. (593 aa)
CUL4BCullin 4B; Belongs to the cullin family. (883 aa)
DCAF17DDB1 and CUL4 associated factor 17. (544 aa)
COMMD9COMM domain containing 9. (199 aa)
USP24Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family. (2612 aa)
DDB1DNA damage-binding protein 1; Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (By similarity). Also appears to function as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the DCX E3 ubiquitin-protein li [...] (1139 aa)
NDRG3NDRG family member 3. (387 aa)
NAE1NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M (By similarity). (535 aa)
FBXW7Uncharacterized protein. (586 aa)
CUL2CULLIN_2 domain-containing protein; Belongs to the cullin family. (774 aa)
UBA3Ubiquitin like modifier activating enzyme 3. (442 aa)
DCAF1DDB1 and CUL4 associated factor 1. (1505 aa)
FBXO22FIST_C domain-containing protein. (393 aa)
FBXO2F-box protein 2. (247 aa)
GPALPP1Uncharacterized protein. (350 aa)
TCEB1Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
FBXO4F-box protein 4. (354 aa)
COMMD2COMM domain containing 2. (249 aa)
NEDD8NEDD8 ubiquitin like modifier. (85 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42. (320 aa)
UBE2MUbiquitin conjugating enzyme E2 M; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
KLHL20Kelch-like protein 20; Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in interferon response and anterograde Golgi to endosome transport. The BCR(KLHL20) E3 ubiquitin ligase complex mediates the ubiquitination of target proteins, leading to their degradation by the proteasome. It also specifically mediates 'Lys-33'-linked ubiquitination (By similarity). (613 aa)
ENSGALP00000058556WD_REPEATS_REGION domain-containing protein. (410 aa)
KLHDC1Kelch domain containing 1. (404 aa)
COPS3COP9 signalosome complex subunit 3; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes (By similarity). The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity (By similarity). (423 aa)
UBE2FNEDD8-conjugating enzyme UBE2F; Accepts the ubiquitin-like protein NEDD8 from the UBA3-NAE1 E1 complex and catalyzes its covalent attachment to other proteins. The specific interaction with the E3 ubiquitin ligase RBX2, but not RBX1, suggests that the RBX2-UBE2F complex neddylates specific target proteins, such as CUL5; Belongs to the ubiquitin-conjugating enzyme family. UBE2F subfamily. (272 aa)
LRR1Leucine rich repeat protein 1. (449 aa)
TRIM63Tripartite motif containing 63. (509 aa)
DCAF11Uncharacterized protein. (92 aa)
SPSB1SplA/ryanodine receptor domain and SOCS box containing 1. (273 aa)
FBXO31F-box protein 31. (573 aa)
DCAF6WD_REPEATS_REGION domain-containing protein. (486 aa)
COMMD6COMM domain containing 6. (207 aa)
DDA1DET1- and DDB1-associated protein 1; May be involved in ubiquitination and subsequent proteasomal degradation of target proteins. Component of the DDD-E2 complexes which may provide a platform for interaction with CUL4A and WD repeat proteins (By similarity); Belongs to the DDA1 family. (166 aa)
ENSGALP00000072290WD_REPEATS_REGION domain-containing protein. (89 aa)
WDTC1WD and tetratricopeptide repeats 1. (697 aa)
COP1COP1 E3 ubiquitin ligase. (723 aa)
ENSGALP00000073564Uncharacterized protein. (243 aa)
ENSGALP00000073605Uncharacterized protein. (253 aa)
ZNF385DUncharacterized protein. (512 aa)
DCAF8Uncharacterized protein. (444 aa)
GPATCH8G-patch domain containing 8. (1660 aa)
DCUN1D2DCN1-like protein. (259 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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