STRINGSTRING
NSF NSF COG4 COG4 STX10 STX10 SYS1 SYS1 RAB9B RAB9B RAB43 RAB43 COG7 COG7 NAPB NAPB VPS54 VPS54 COG2 COG2 TMF1 TMF1 NAPG NAPG RHOBTB3 RHOBTB3 RIC1 RIC1 RAB9A RAB9A GCC2 GCC2 COG3 COG3 RAB6A RAB6A VAMP3 VAMP3 VPS51 VPS51 ARFIP2 ARFIP2 NAPA NAPA GOLGA4 GOLGA4 VPS53 VPS53 COG8 COG8 COG5 COG5 PLIN4 PLIN4 IGF2R IGF2R USP6NL USP6NL GCC1 GCC1 VAMP4 VAMP4 COG1 COG1 STX16 STX16 VTI1A VTI1A ARL1 ARL1 M6PR M6PR RGP1 RGP1 SCOC SCOC TGOLN2 TGOLN2 GOLGA1 GOLGA1 ARFRP1 ARFRP1 COG6 COG6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NSFUncharacterized protein. (740 aa)
COG4Cog4 domain-containing protein. (771 aa)
STX10Syntaxin-6; Involved in intracellular vesicle trafficking; Belongs to the syntaxin family. (254 aa)
SYS1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
RAB9BRAB9B, member RAS oncogene family. (261 aa)
RAB43Uncharacterized protein. (215 aa)
COG7Uncharacterized protein. (769 aa)
NAPBUncharacterized protein. (296 aa)
VPS54VPS54 subunit of GARP complex. (974 aa)
COG2Component of oligomeric golgi complex 2. (739 aa)
TMF1TATA element modulatory factor 1. (1105 aa)
NAPGNSF attachment protein gamma. (314 aa)
RHOBTB3Rho related BTB domain containing 3. (618 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1419 aa)
RAB9AUncharacterized protein. (201 aa)
GCC2GRIP and coiled-coil domain containing 2. (1693 aa)
COG3Component of oligomeric golgi complex 3. (825 aa)
RAB6ARas-related protein Rab-6A; Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER). Involved in COPI-independent retrograde transport from the Golgi to the ER. Belongs to the small GTPase superfamily. Rab family. (208 aa)
VAMP3V-SNARE coiled-coil homology domain-containing protein. (104 aa)
VPS51Vacuolar protein sorting-associated protein 51 homolog; Involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of protein retrieval from endosomes to the TGN, acid hydrolase sorting, lysosome function, endosomal cholesterol traffic and autophagy. Acts as component of the EARP complex that is involved in endocytic recycling. (787 aa)
ARFIP2ADP ribosylation factor interacting protein 2. (394 aa)
NAPANSF attachment protein alpha. (313 aa)
GOLGA4Golgin A4. (2285 aa)
VPS53Vacuolar protein sorting-associated protein 53 homolog; Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). Acts as component of the EARP complex that is involved in endocytic recycling. (831 aa)
COG8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (599 aa)
COG5Uncharacterized protein. (941 aa)
PLIN4Perilipin; Belongs to the perilipin family. (429 aa)
IGF2RFibronectin type-II domain-containing protein. (2561 aa)
USP6NLRab-GAP TBC domain-containing protein. (841 aa)
GCC1GRIP domain-containing protein. (784 aa)
VAMP4Vesicle associated membrane protein 4. (141 aa)
COG1Uncharacterized protein. (957 aa)
STX16t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (326 aa)
VTI1At-SNARE coiled-coil homology domain-containing protein. (224 aa)
ARL1Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (231 aa)
M6PRMannose-6-phosphate receptor, cation dependent. (328 aa)
RGP1Uncharacterized protein. (470 aa)
SCOCUncharacterized protein. (120 aa)
TGOLN2Uncharacterized protein. (445 aa)
GOLGA1Golgin A1. (810 aa)
ARFRP1ADP ribosylation factor related protein 1. (256 aa)
COG6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (643 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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