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RAD21L1 RAD21L1 POLL POLL SAMHD1 SAMHD1 CDC45 CDC45 RECQL5 RECQL5 BRCA1 BRCA1 ERCC4 ERCC4 RPA1 RPA1 CDK1 CDK1 LOC427439 LOC427439 MAD2L2 MAD2L2 TOP3A TOP3A MCM2 MCM2 CDC7 CDC7 PALB2 PALB2 NSMCE1 NSMCE1 TM4SF19 TM4SF19 RMI2 RMI2 EPC1 EPC1 BLM BLM MCM8 MCM8 EXD2 EXD2 SHFM1 SHFM1 RPA3 RPA3 PSMD14 PSMD14 HELQ HELQ DMC1 DMC1 MCM5 MCM5 RMI1 RMI1 MCM4 MCM4 RECQL RECQL MCM9 MCM9 RBBP8 RBBP8 REV3L REV3L SMC5 SMC5 MMS22L MMS22L SMC6 SMC6 GEN1 GEN1 FANCB FANCB MCM3 MCM3 BRCA2 BRCA2 ATM ATM MRE11 MRE11 RAD51AP1 RAD51AP1 WDR48 WDR48 MCM6 MCM6 MEIOB MEIOB RNF138 RNF138 RAD54L RAD54L ZSWIM7 ZSWIM7 LOC427025 LOC427025 LOC101748706 LOC101748706 XRCC2 XRCC2 NABP1 NABP1 ZFYVE26 ZFYVE26 AP5Z1 AP5Z1 RAD51 RAD51 MCMDC2 MCMDC2 MBTD1 MBTD1 RAD54B RAD54B NSMCE2 NSMCE2 RAD21 RAD21 GINS2 GINS2 HUS1 HUS1 NBN NBN NABP2 NABP2 PRKDC PRKDC XRCC3 XRCC3 RAD52 RAD52 RAD51AP2 RAD51AP2 INTS3 INTS3 ENSGALP00000065485 ENSGALP00000065485 NUCKS1 NUCKS1 ENSGALP00000066976 ENSGALP00000066976 INIP INIP WRN WRN RAD51B RAD51B RAD51C RAD51C SLX4 SLX4 RAD51D RAD51D AP5S1 AP5S1 RFWD3 RFWD3 SPIDR SPIDR FANCM FANCM ENSGALP00000070978 ENSGALP00000070978 FBXO18 FBXO18 FAN1 FAN1 INO80 INO80 SFR1 SFR1 SWI5 SWI5 ANKLE1 ANKLE1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
RAD21L1RAD21 cohesin complex component like 1. (673 aa)
POLLDNA polymerase lambda. (844 aa)
SAMHD1Deoxynucleoside triphosphate triphosphohydrolase SAMHD1; Protein that acts both as a host restriction factor involved in defense response to virus and as a regulator of DNA end resection at stalled replication forks. Has deoxynucleoside triphosphate (dNTPase) activity, which is required to restrict infection by viruses: dNTPase activity reduces cellular dNTP levels to levels too low for retroviral reverse transcription to occur, blocking early-stage virus replication in dendritic and other myeloid cells. Functions during S phase at stalled DNA replication forks to promote the resection [...] (614 aa)
CDC45Cell division cycle 45. (566 aa)
RECQL5Uncharacterized protein. (1052 aa)
BRCA1Uncharacterized protein. (1749 aa)
ERCC4ERCC4 domain-containing protein. (903 aa)
RPA1Replication protein A 70 kDa DNA-binding subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (614 aa)
CDK1Cyclin-dependent kinase 1; Plays a key role in the control of the eukaryotic cell cycle (By similarity). It is required in higher cells for entry into S-phase and mitosis (By similarity). p34 is a component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II (By similarity). May play a role in regulating the amplitude of the cyclic expression of circadian clock genes (By similarity). Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (303 aa)
LOC427439Nipped-B protein. (2783 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B; Adapter protein able to interact with different proteins and involved in different biological processes. Mediates the interaction between the error-prone DNA polymerase zeta catalytic subunit REV3L and the inserter polymerase REV1, thereby mediating the second polymerase switching in translesion DNA synthesis. Translesion DNA synthesis releases the replication blockade of replicative polymerases, stalled in presence of DNA lesions. May also play a role in signal transduction in response to DNA damage. May regulate the activation of the [...] (211 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1020 aa)
MCM2DNA helicase; Belongs to the MCM family. (929 aa)
CDC7Cell division cycle 7. (564 aa)
PALB2Partner and localizer of BRCA2. (1341 aa)
NSMCE1NSE1 homolog, SMC5-SMC6 complex component. (256 aa)
TM4SF19Uncharacterized protein. (220 aa)
RMI2RecQ-mediated genome instability protein 2; Essential component of the RMI complex, a complex that plays an important role in the processing of homologous recombination intermediates. It is required to regulate sister chromatid segregation and to limit DNA crossover. Essential for the stability, localization, and function of BLM, TOP3A, and complexes containing BLM. In the RMI complex, it is required to target BLM to chromatin and stress-induced nuclear foci and mitotic phosphorylation of BLM. (137 aa)
EPC1Enhancer of polycomb homolog. (814 aa)
BLMBloom syndrome protein homolog; ATP-dependent DNA helicase that unwinds single- and double- stranded DNA in a 3'-5' direction. Participates in DNA replication and repair (By similarity). Involved in 5'-end resection of DNA during double-strand break (DSB) repair (By similarity). Negatively regulates sister chromatid exchange (SCE) (By similarity). Stimulates DNA 4-way junction branch migration and DNA Holliday junction dissolution (By similarity). Binds DNA. Binds single-stranded DNA (ssDNA), forked duplex DNA and DNA Holliday junction (By similarity). Belongs to the helicase family. R [...] (1380 aa)
MCM8DNA helicase MCM8; Component of the MCM8-MCM9 complex, a complex involved in homologous recombination repair following DNA interstrand cross-links and plays a key role during gametogenesis. The MCM8-MCM9 complex probably acts as a hexameric helicase required to process aberrant forks into homologous recombination substrates and to orchestrate homologous recombination with resection, fork stabilization and fork restart. (830 aa)
EXD23'-5' exonuclease domain-containing protein. (621 aa)
SHFM1Uncharacterized protein. (70 aa)
RPA3Replication protein A3. (121 aa)
PSMD14MPN domain-containing protein. (310 aa)
HELQHelicase, POLQ like. (1048 aa)
DMC1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (328 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
RMI1RecQ-mediated genome instability protein 1; Essential component of the RMI complex, a complex that plays an important role in the processing of homologous recombination intermediates to limit DNA crossover formation in cells. Promotes TOP3A binding to double Holliday junctions (DHJ) and hence stimulates TOP3A- mediated dissolution. Required for BLM phosphorylation during mitosis. Within the BLM complex, required for BLM and TOP3A stability (By similarity). (627 aa)
MCM4DNA helicase; Belongs to the MCM family. (859 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (661 aa)
MCM9DNA helicase MCM9; Component of the MCM8-MCM9 complex, a complex involved in homologous recombination repair following DNA interstrand cross-links and plays a key role during gametogenesis. The MCM8-MCM9 complex probably acts as a hexameric helicase required to process aberrant forks into homologous recombination substrates and to orchestrate homologous recombination with resection, fork stabilization and fork restart. (1169 aa)
RBBP8RB binding protein 8, endonuclease. (912 aa)
REV3LREV3 like, DNA directed polymerase zeta catalytic subunit. (3167 aa)
SMC5Structural maintenance of chromosomes protein 5; Core component of the SMC5-SMC6 complex, a complex involved in repair of DNA double-strand breaks by homologous recombination. The complex may promote sister chromatid homologous recombination by recruiting the SMC1-SMC3 cohesin complex to double-strand breaks. The complex is required for telomere maintenance via recombination and mediates sumoylation of shelterin complex (telosome) components. Required for recruitment of telomeres to PML nuclear bodies. Required for sister chromatid cohesion during prometaphase and mitotic progression; [...] (1065 aa)
MMS22LProtein MMS22-like; Component of the MMS22L-TONSL complex, a complex that stimulates the recombination-dependent repair of stalled or collapsed replication forks. (1399 aa)
SMC6SMC_N domain-containing protein. (1096 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (941 aa)
FANCBUncharacterized protein. (965 aa)
MCM3DNA replication licensing factor MCM3; Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (812 aa)
BRCA2Tower domain-containing protein. (3397 aa)
ATMNon-specific serine/threonine protein kinase. (3050 aa)
MRE11Double-strand break repair protein MRE11; Component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. The complex possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity, which are provided by MRE11. RAD50 may be required to bind DNA ends and hold them in close proximity. This could facilitate searches for short or long regions of sequence homology in the recombining DNA templates, and may also stimulate the activity of DNA ligases and/or restr [...] (709 aa)
RAD51AP1Uncharacterized protein. (255 aa)
WDR48WD repeat-containing protein 48; Regulator of deubiquitinating complexes. Acts as a strong activator of USP1 and USP46. Enhances the USP1-mediated deubiquitination of FANCD2; USP1 being almost inactive by itself. Also activates deubiquitinating activity of complexes containing USP12. Activates deubiquitination by increasing the catalytic turnover without increasing the affinity of deubiquitinating enzymes for the substrate. May play a role in vesicular transport or membrane fusion events necessary for transport to lysosomes. (678 aa)
MCM6DNA helicase; Belongs to the MCM family. (825 aa)
MEIOBMeiosis specific with OB-fold. (344 aa)
RNF138Ring finger protein 138. (246 aa)
RAD54LDNA repair and recombination protein RAD54-like; Involved in DNA repair and mitotic recombination; Belongs to the SNF2/RAD54 helicase family. (804 aa)
ZSWIM7SWIM-type domain-containing protein. (140 aa)
LOC427025Nipped-B protein. (2769 aa)
LOC101748706Uncharacterized protein. (2151 aa)
XRCC2X-ray repair cross complementing 2. (279 aa)
NABP1Nucleic acid binding protein 1. (209 aa)
ZFYVE26Zinc finger FYVE-type containing 26. (2561 aa)
AP5Z1Adaptor related protein complex 5 subunit zeta 1. (814 aa)
RAD51DNA repair protein RAD51 homolog 1; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. (339 aa)
MCMDC2Uncharacterized protein. (356 aa)
MBTD1Mbt domain containing 1. (685 aa)
RAD54BDNA repair and recombination protein RAD54B; Involved in DNA repair and mitotic recombination; Belongs to the SNF2/RAD54 helicase family. (918 aa)
NSMCE2SP-RING-type domain-containing protein. (239 aa)
RAD21Uncharacterized protein. (633 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (284 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. The complex possesses single-strand endonuclease activity and double-strand- specific 3'-5' exonuclease activity, which are provided by MRE11. RAD50 may be required to bind DNA ends and hold them in close proximity. NBN modulate the DNA damage signal sensing by recr [...] (753 aa)
NABP2Nucleic acid binding protein 2. (225 aa)
PRKDCDNA-dependent protein kinase catalytic subunit; Serine/threonine-protein kinase that acts as a molecular sensor for DNA damage. Involved in DNA nonhomologous end joining (NHEJ) required for double-strand break (DSB) repair and V(D)J recombination. Must be bound to DNA to express its catalytic properties. Promotes processing of hairpin DNA structures in V(D)J recombination by activation of the hairpin endonuclease artemis (DCLRE1C). The assembly of the DNA-PK complex at DNA ends is also required for the NHEJ ligation step. Required to protect and align broken ends of DNA. May also act a [...] (4132 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (382 aa)
RAD52DNA repair protein RAD52 homolog; Involved in double-stranded break repair. Plays a central role in genetic recombination and DNA repair by promoting the annealing of complementary single-stranded DNA and by stimulation of the RAD51 recombinase (By similarity). (422 aa)
RAD51AP2Uncharacterized protein. (1331 aa)
INTS3Integrator complex subunit 3. (1116 aa)
ENSGALP00000065485GIY-YIG domain-containing protein. (71 aa)
NUCKS1Uncharacterized protein. (355 aa)
ENSGALP00000066976Uncharacterized protein. (39 aa)
INIPSOSS complex subunit C; Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) (By similarity). (155 aa)
WRNUncharacterized protein. (1622 aa)
RAD51BRAD51 paralog B. (415 aa)
RAD51CRAD51 paralog C. (360 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1740 aa)
RAD51DRECA_2 domain-containing protein. (327 aa)
AP5S1Adaptor related protein complex 5 subunit sigma 1. (184 aa)
RFWD3Ring finger and WD repeat domain 3. (752 aa)
SPIDRScaffold protein involved in DNA repair. (937 aa)
FANCMFanconi anemia group M protein; DNA-dependent ATPase component of the Fanconi anemia (FA) core complex (By similarity). Required for the normal activation of the FA pathway, leading to monoubiquitination of the FANCI-FANCD2 complex in response to DNA damage, cellular resistance to DNA cross-linking drugs, and prevention of chromosomal breakage. In complex with CENPS and CENPX, binds double- stranded DNA (dsDNA), fork-structured DNA (fsDNA) and Holliday junction substrates (By similarity). Its ATP-dependent DNA branch migration activity can process branched DNA structures such as a mova [...] (2101 aa)
ENSGALP00000070978XRCC1_N domain-containing protein. (182 aa)
FBXO18F-box DNA helicase 1; 3'-5' DNA helicase and substrate-recognition component of the SCF(FBH1) E3 ubiquitin ligase complex that plays a key role in response to stalled/damaged replication forks (By similarity). Involved in genome maintenance by acting as an anti-recombinogenic helicase and preventing extensive strand exchange during homologous recombination: promotes RAD51 filament dissolution from stalled forks, thereby inhibiting homologous recombination and preventing excessive recombination. Also promotes cell death and DNA double-strand breakage in response to replication stress: p [...] (1021 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1034 aa)
INO80Uncharacterized protein. (1565 aa)
SFR1Swi5-dependent recombination DNA repair protein 1 homolog; Component of the SWI5-SFR1 complex, a complex required for double-strand break repair via homologous recombination (By similarity). May act as a transcriptional modulator for ESR1 (By similarity). (222 aa)
SWI5SWI5 homologous recombination repair protein. (117 aa)
ANKLE1Ankyrin repeat and LEM domain containing 1. (609 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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