STRINGSTRING
LHX3 LHX3 TLX3 TLX3 LEUTX LEUTX TBX4 TBX4 HNF1B HNF1B TBX6 TBX6 SHH SHH SUFU SUFU TBX5 TBX5 DMRT3 DMRT3 IHH IHH TBXT TBXT TBX15 TBX15 TBX19 TBX19 MYL2 MYL2 SOX9 SOX9 HOXD10 HOXD10 TBX22 TBX22 EOMES EOMES FEV FEV ISL1 ISL1 SOX17 SOX17 TBX3 TBX3 CTNNB1 CTNNB1 HOXA11 HOXA11 PTCH2 PTCH2 POU4F1 POU4F1 OLIG2 OLIG2 TBX18 TBX18 PRDM14 PRDM14 TBR1 TBR1 SMO SMO GSX2 GSX2 SOX1 SOX1 SOX18 SOX18 APC APC MYL10 MYL10 TBX20 TBX20 TENM4 TENM4 DHH DHH HOXC10 HOXC10 ISL2 ISL2 MNX1 MNX1 TBX1 TBX1 TBX2 TBX2 LHX4 LHX4 GSC GSC FKBP8 FKBP8 DLL1 DLL1 PSEN1 PSEN1 TBX21 TBX21 TLX2 TLX2 HOXC11 HOXC11 MGA MGA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LHX3LIM/homeobox protein Lhx3; Transcriptional factor that defines subclasses of motoneurons that segregate into columns in the spinal cord and select distinct axon pathways. Acts in conjunction with LIM-1, ISL-1 and ISL-2. (395 aa)
TLX3T-cell leukemia homeobox protein 3; Seems to be involved in the development of cranial sensory innervation from peripheral ganglia. (296 aa)
LEUTXHomeobox domain-containing protein. (403 aa)
TBX4T-Box protein 4. (541 aa)
HNF1BHNF1 homeobox B. (531 aa)
TBX6T-box-containing protein TBX6L; May be involved in regulating somitogenesis. (452 aa)
SHHSonic hedgehog protein N-product; [Sonic hedgehog protein]: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). (425 aa)
SUFUSuppressor of fused homolog. (484 aa)
TBX5T-box transcription factor TBX5; DNA-binding protein that regulates the transcription of several genes and is involved in heart development and limb pattern formation. May bind to the core DNA motif of promoters. (521 aa)
DMRT3Doublesex and mab-3 related transcription factor 3. (466 aa)
IHHIndian hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Binds to the patched (PTC) receptor, which functions in association with smoothened (SMO), to activate the transcription of target genes. Implicated in endochondral ossification: may regulate the balance between growth and ossification of the developing bones. Induces the expression of parathyroid hormone-related protein (PTHRP); Belongs to the hedgehog family. (408 aa)
TBXTT-box transcription factor T; Involved in the transcriptional regulation of genes required for mesoderm formation and differentiation. Binds to a palindromic site (called T site) and activates gene transcription when bound to such a site. (433 aa)
TBX15T-box transcription factor 15. (601 aa)
TBX19T-box transcription factor TBX19; May be involved in the initial formation of the chordamesoderm. (397 aa)
MYL2Myosin regulatory light chain 2A, cardiac muscle isoform. (202 aa)
SOX9Transcription factor SOX-9; Transcription factor that selectively activates enhancer through its interaction with a DNA-binding partner factor. Activates enhancer of COL2A1 through its binding with DNA sequence 5'-ATTCAT-3'. In response to bone morphogenetic protein stimulus, phosphorylation is induced and then sumoylation, allowing cooperation with SNAI2 to trigger neural crest delamination. Functions at the level of mesenchymal cell condensation by inducing cartilage development in limbs and by changing the aggregation properties of limb mesenchymal cells. Regulates the cell fate dec [...] (494 aa)
HOXD10Homeobox protein Hox-D10; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (339 aa)
TBX22T-box transcription factor Tbx22. (489 aa)
EOMEST-box_assoc domain-containing protein. (661 aa)
FEVFEV transcription factor, ETS family member. (212 aa)
ISL1Insulin gene enhancer protein ISL-1; Acts as a transcriptional regulator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA- 3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. Binds to insulin gene enhancer sequences (By similarity). Defines subclasses of motoneurons that segregate into columns in the spinal cord and select distinct axon pathways. Acts in conjunction with LHX1, LHX3 and ISL2. Binds to insulin gene enhancer sequences (By similarity). Essential for heart d [...] (349 aa)
SOX17Uncharacterized protein. (410 aa)
TBX3T-box transcription factor TBX3; Transcriptional repressor involved in developmental processes. Probably plays a role in limb pattern formation. (732 aa)
CTNNB1Uncharacterized protein. (781 aa)
HOXA11Homeobox protein Hox-A11; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family. (297 aa)
PTCH2Patched 2. (1266 aa)
POU4F1POU domain, class 4, transcription factor 1; Multifunctional transcription factor with different regions mediating its different effects. Acts by binding (via its C-terminal domain) to sequences related to the consensus octamer motif 5'- ATGCAAAT-3' in the regulatory regions of its target genes. Regulates the expression of specific genes involved in differentiation and survival within a subset of neuronal lineages. It has been shown that activation of some of these genes requires its N-terminal domain, maybe through a neuronal-specific cofactor; Belongs to the POU transcription factor [...] (389 aa)
OLIG2Oligodendrocyte transcription factor 2; Required for oligodendrocyte and motor neuron specification in the spinal cord. (298 aa)
TBX18Uncharacterized protein. (589 aa)
PRDM14PR/SET domain 14. (514 aa)
TBR1T-box brain transcription factor 1. (677 aa)
SMOSmoothened homolog; G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO). (816 aa)
GSX2GS homeobox 2. (263 aa)
SOX1Transcription factor SOX-1; Transcriptional activator. May function as a switch in neuronal development. Keeps neural cells undifferentiated by counteracting the activity of proneural protein and suppresses neuronal differentiation. (373 aa)
SOX18Transcription factor SOX18. (418 aa)
APCAPC regulator of WNT signaling pathway. (2853 aa)
MYL10Myosin regulatory light chain 2B, cardiac muscle isoform. (187 aa)
TBX20T-box transcription factor TBX20; Acts as a transcriptional regulator involved in heart developmental processes. (440 aa)
TENM4Uncharacterized protein. (2766 aa)
DHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
HOXC10Homeobox domain-containing protein. (354 aa)
ISL2Insulin gene enhancer protein ISL-2; Transcriptional factor that defines subclasses of motoneurons that segregate into columns in the spinal cord and select distinct axon pathways. Acts in conjunction with LIM-1, LIM-3 and ISL-1. (356 aa)
MNX1Homeobox domain-containing protein. (348 aa)
TBX1Uncharacterized protein. (539 aa)
TBX2T-box transcription factor 2. (693 aa)
LHX4LIM homeobox 4. (533 aa)
GSCHomeobox protein goosecoid; Involved in the development of the organizer region in the gastrula (Hensen node in chicken). (346 aa)
FKBP8Peptidylprolyl isomerase. (686 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (893 aa)
PSEN1Presenilin-1 CTF subunit; Catalytic subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors and APP (amyloid- beta precursor protein). Requires the presence of the other members of the gamma-secretase complex for protease activity. Plays a role in Notch and Wnt signaling cascades and regulation of downstream processes via its role in processing key regulatory proteins. Belongs to the peptidase A22A family. (468 aa)
TBX21T-box transcription factor 21. (580 aa)
TLX2Homeobox domain-containing protein. (634 aa)
HOXC11Homeobox C11. (193 aa)
MGAMAX dimerization protein MGA. (3228 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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