STRINGSTRING
MFSD2A MFSD2A PBLD PBLD HOMER2 HOMER2 ABCC8 ABCC8 USH1C USH1C ERCC6 ERCC6 SHH SHH RBP4A RBP4A LRRK1 LRRK1 VSIG1 VSIG1 VPS54 VPS54 MKKS MKKS USH2A USH2A CLRN1 CLRN1 WWTR1 WWTR1 SNX10 SNX10 ITGB6 ITGB6 IHH IHH IQCB1 IQCB1 BCL2 BCL2 STRAP STRAP ZNF830 ZNF830 FH FH IL20RB IL20RB KDR KDR CYTL1 CYTL1 ILDR2 ILDR2 LCA5 LCA5 TFF2 TFF2 IL17A IL17A BBS4 BBS4 TSTD1 TSTD1 FGF2 FGF2 RHO RHO SOX9 SOX9 CRB2 CRB2 MBL2 MBL2 TNFSF11 TNFSF11 NKIRAS2 NKIRAS2 NXNL2 NXNL2 NANOS1 NANOS1 PTH PTH TJP1 TJP1 USH1G USH1G CTNNB1 CTNNB1 CLN8 CLN8 CROCC CROCC TPP1 TPP1 NXNL1 NXNL1 ENSGALP00000047771 ENSGALP00000047771 PRDM14 PRDM14 NPHP4 NPHP4 SLC2A1 SLC2A1 SMO SMO TJP2 TJP2 MUC6 MUC6 DRAM2 DRAM2 NOV NOV ENSGALP00000051627 ENSGALP00000051627 CTSH CTSH IL7 IL7 SRF SRF BBS10 BBS10 HOMER1 HOMER1 GIGYF2 GIGYF2 ACP5 ACP5 BBS2 BBS2 SASH3 SASH3 EPAS1 EPAS1 PRLH PRLH MKS1 MKS1 CSF1 CSF1 ENSGALP00000065224 ENSGALP00000065224 MTF1 MTF1 CLDN5 CLDN5 BSG BSG CD34 CD34 BBS12 BBS12 ANKRD31 ANKRD31 NOX4 NOX4 NKIRAS1 NKIRAS1 INAVA INAVA TRAF6 TRAF6 USP45 USP45 RP1L1 RP1L1 TJP3 TJP3 SPATA7 SPATA7 CCDC66 CCDC66 ADGRV1 ADGRV1 CRACD CRACD LRRC45 LRRC45 CRB1 CRB1 KLHL10 KLHL10 RB1 RB1 WHRN WHRN ENSGALP00000071692 ENSGALP00000071692 ANKRD11 ANKRD11 ENSGALP00000073923 ENSGALP00000073923 ADGRF5 ADGRF5 TP53INP2 TP53INP2 LPCAT1 LPCAT1 SRC SRC P2RX7 P2RX7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MFSD2AMajor facilitator superfamily domain containing 2A. (528 aa)
PBLDUncharacterized protein. (288 aa)
HOMER2Homer scaffold protein 2. (356 aa)
ABCC8ATP binding cassette subfamily C member 8. (1595 aa)
USH1CUSH1 protein network component harmonin. (556 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1495 aa)
SHHSonic hedgehog protein N-product; [Sonic hedgehog protein]: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). (425 aa)
RBP4ARetinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family. (196 aa)
LRRK1Leucine rich repeat kinase 1. (1998 aa)
VSIG1V-set and immunoglobulin domain-containing protein 1. (335 aa)
VPS54VPS54 subunit of GARP complex. (974 aa)
MKKSUncharacterized protein. (570 aa)
USH2AUsherin. (5190 aa)
CLRN1Clarin 1. (232 aa)
WWTR1WW domain containing transcription regulator 1. (386 aa)
SNX10PX domain-containing protein. (201 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (789 aa)
IHHIndian hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Binds to the patched (PTC) receptor, which functions in association with smoothened (SMO), to activate the transcription of target genes. Implicated in endochondral ossification: may regulate the balance between growth and ossification of the developing bones. Induces the expression of parathyroid hormone-related protein (PTHRP); Belongs to the hedgehog family. (408 aa)
IQCB1IQ motif containing B1. (597 aa)
BCL2Apoptosis regulator Bcl-2; Suppresses apoptosis in a variety of cell systems including factor-dependent lymphohematopoietic and neural cells. Regulates cell death by controlling the mitochondrial membrane permeability. Appears to function in a feedback loop system with caspases. Inhibits caspase activity either by preventing the release of cytochrome c from the mitochondria and/or by binding to the apoptosis-activating factor (APAF-1). (233 aa)
STRAPSerine-threonine kinase receptor-associated protein; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins are trapped in an inactive complex. The SMN complex triggers the assembly of core snRNPs and their transport to the nucleus. ST [...] (350 aa)
ZNF830Zinc finger protein 830. (532 aa)
FHUncharacterized protein. (507 aa)
IL20RBInterleukin 20 receptor subunit beta. (312 aa)
KDRUncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1348 aa)
CYTL1Cytokine like 1. (132 aa)
ILDR2Immunoglobulin like domain containing receptor 2. (628 aa)
LCA5Lebercilin LCA5. (683 aa)
TFF2Trefoil factor 2. (127 aa)
IL17AUncharacterized protein. (169 aa)
BBS4TPR_REGION domain-containing protein. (532 aa)
TSTD1Uncharacterized protein. (358 aa)
FGF2Fibroblast growth factor 2; Acts as a ligand for FGFR1, FGFR2, FGFR3 and FGFR4. Also acts as an integrin ligand which is required for FGF2 signaling. Plays an important role in the regulation of cell survival, cell division, cell differentiation and cell migration. Functions as a potent mitogen in vitro. Can induce angiogenesis; Belongs to the heparin-binding growth factors family. (158 aa)
RHORhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). (351 aa)
SOX9Transcription factor SOX-9; Transcription factor that selectively activates enhancer through its interaction with a DNA-binding partner factor. Activates enhancer of COL2A1 through its binding with DNA sequence 5'-ATTCAT-3'. In response to bone morphogenetic protein stimulus, phosphorylation is induced and then sumoylation, allowing cooperation with SNAI2 to trigger neural crest delamination. Functions at the level of mesenchymal cell condensation by inducing cartilage development in limbs and by changing the aggregation properties of limb mesenchymal cells. Regulates the cell fate dec [...] (494 aa)
CRB2Uncharacterized protein. (1469 aa)
MBL2Mannose-binding protein; Calcium-dependent lectin involved in innate immune defense. Binds mannose, fucose and N-acetylglucosamine on different microorganisms and activates the lectin complement pathway. (254 aa)
TNFSF11TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (400 aa)
NKIRAS2NF-kappa-B inhibitor-interacting Ras-like protein 2; Atypical Ras-like protein that acts as a potent regulator of NF-kappa-B activity by preventing the degradation of NF-kappa-B inhibitor beta (NFKBIB) by most signals, explaining why NFKBIB is more resistant to degradation. (191 aa)
NXNL2Nucleoredoxin like 2. (156 aa)
NANOS1Nanos C2HC-type zinc finger 1; Belongs to the nanos family. (254 aa)
PTHParathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family. (119 aa)
TJP1Tight junction protein 1; Belongs to the MAGUK family. (1771 aa)
USH1GUSH1 protein network component sans. (457 aa)
CTNNB1Uncharacterized protein. (781 aa)
CLN8TLC domain-containing protein. (285 aa)
CROCCUncharacterized protein. (971 aa)
TPP1Tripeptidyl peptidase 1. (575 aa)
NXNL1Nucleoredoxin like 1. (205 aa)
ENSGALP00000047771Uncharacterized protein. (240 aa)
PRDM14PR/SET domain 14. (514 aa)
NPHP4Nephrocystin 4. (1386 aa)
SLC2A1Solute carrier family 2, facilitated glucose transporter member 1; Facilitative glucose transporter, which is responsible for constitutive or basal glucose uptake. Has a very broad substrate specificity; can transport a wide range of aldoses including both pentoses and hexoses. Most important energy carrier of the brain: present at the blood-brain barrier and assures the energy-independent, facilitative transport of glucose into the brain. (490 aa)
SMOSmoothened homolog; G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO). (816 aa)
TJP2Uncharacterized protein; Belongs to the MAGUK family. (1373 aa)
MUC6Mucin-6; Ovomucin, the glycoprotein responsible for the gel properties of egg white, is composed for 2 subunits, alpha-ovomucin/MUC5B and beta-ovomucin/MUC6. (1173 aa)
DRAM2DNA damage regulated autophagy modulator 2. (266 aa)
NOVCTCK domain-containing protein. (360 aa)
ENSGALP00000051627ANK_REP_REGION domain-containing protein. (323 aa)
CTSHUncharacterized protein; Belongs to the peptidase C1 family. (403 aa)
IL7Interleukin-7. (146 aa)
SRFSerum response factor; SRF is a transcription factor that binds to the serum response element (SRE), a short sequence of dyad symmetry located 300 bp to the 5' of the site of transcription initiation of some genes (such as FOS). Together with MRTFA transcription coactivator, controls expression of genes regulating the cytoskeleton during development, morphogenesis and cell migration. (492 aa)
BBS10Uncharacterized protein. (317 aa)
HOMER1Homer scaffold protein 1. (358 aa)
GIGYF2GYF domain-containing protein. (1278 aa)
ACP5Tartrate-resistant acid phosphatase type 5. (321 aa)
BBS2Bardet-Biedl syndrome 2 protein homolog. (721 aa)
SASH3Uncharacterized protein. (382 aa)
EPAS1Endothelial PAS domain protein 1. (867 aa)
PRLHUncharacterized protein. (87 aa)
MKS1MKS transition zone complex subunit 1. (562 aa)
CSF1Uncharacterized protein. (493 aa)
ENSGALP00000065224Uncharacterized protein. (381 aa)
MTF1Uncharacterized protein. (729 aa)
CLDN5Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (216 aa)
BSGBasigin; Plays an important role in targeting monocarboxylate transporters to the plasma membrane (By similarity). Probable receptor involved in cell surface recognition at the blood-brain barrier. Involved in neuronal-glial interactions in retinal development. (388 aa)
CD34CD34 molecule. (385 aa)
BBS12Bardet-Biedl syndrome 12. (777 aa)
ANKRD31Uncharacterized protein. (1555 aa)
NOX4FAD-binding FR-type domain-containing protein. (639 aa)
NKIRAS1NFKB inhibitor interacting Ras like 1. (230 aa)
INAVAInnate immunity activator. (565 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (545 aa)
USP45Ubiquitin carboxyl-terminal hydrolase. (815 aa)
RP1L1Uncharacterized protein. (2325 aa)
TJP3Tight junction protein 3; Belongs to the MAGUK family. (1069 aa)
SPATA7Spermatogenesis associated 7. (565 aa)
CCDC66Coiled-coil domain containing 66. (995 aa)
ADGRV1Uncharacterized protein. (4788 aa)
CRACDKIAA1211. (1561 aa)
LRRC45Leucine-rich repeat-containing protein 45; Component of the proteinaceous fiber-like linker between two centrioles, required for centrosome cohesion. (670 aa)
CRB1Crumbs cell polarity complex component 1. (807 aa)
KLHL10BTB domain-containing protein. (584 aa)
RB1Retinoblastoma-associated protein; Key regulator of entry into cell division that acts as a tumor suppressor. Acts as a transcription repressor of E2F1 target genes. Directly involved in heterochromatin formation by maintaining overall chromatin structure and, in particular, that of constitutive heterochromatin by stabilizing histone methylation. Recruits and targets histone methyltransferases SUV39H1, KMT5B and KMT5C, leading to epigenetic transcriptional repression. Controls histone H4 'Lys-20' trimethylation. Also acts as a transcription repressor of E2F target genes by recruiting c [...] (984 aa)
WHRNWhirlin. (926 aa)
ENSGALP00000071692Uncharacterized protein. (105 aa)
ANKRD11Ankyrin repeat domain 11. (2707 aa)
ENSGALP00000073923Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (324 aa)
ADGRF5Adhesion G protein-coupled receptor F5; Belongs to the G-protein coupled receptor 2 family. (1342 aa)
TP53INP2Tumor protein p53 inducible nuclear protein 2. (213 aa)
LPCAT1Lysophosphatidylcholine acyltransferase 1. (484 aa)
SRCProto-oncogene tyrosine-protein kinase Src; Non-receptor protein tyrosine kinase which is activated following engagement of many different classes of cellular receptors including immune response receptors, integrins and other adhesion receptors, receptor protein tyrosine kinases, G protein-coupled receptors as well as cytokine receptors. Participates in signaling pathways that control a diverse spectrum of biological activities including gene transcription, immune response, cell adhesion, cell cycle progression, apoptosis, migration, and transformation. Due to functional redundancy bet [...] (539 aa)
P2RX7P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (574 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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