STRINGSTRING
CPSF4L CPSF4L CPSF7 CPSF7 ENSGALP00000056134 ENSGALP00000056134 CSNK1A1 CSNK1A1 ENSGALP00000066296 ENSGALP00000066296 FIP1L1 FIP1L1 SCAF8 SCAF8 CPSF2 CPSF2 CSTF1 CSTF1 CLP1 CLP1 SSU72 SSU72 ZC3H3 ZC3H3 WDR33 WDR33 NUDT21 NUDT21 CSTF2 CSTF2 TMEM240 TMEM240 CPSF4 CPSF4 PCF11 PCF11 CPSF3 CPSF3 CPSF6 CPSF6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CPSF4LUncharacterized protein. (193 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (533 aa)
ENSGALP00000056134Uncharacterized protein. (348 aa)
CSNK1A1Casein kinase I isoform alpha; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. May play a role in segregating chromosomes during mitosis. May play a role in keratin cytoskeleton disassembly. (370 aa)
ENSGALP00000066296Uncharacterized protein. (471 aa)
FIP1L1Fip1 domain-containing protein. (545 aa)
SCAF8SR-related CTD associated factor 8. (1301 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CSTF1Cleavage stimulation factor subunit 1. (537 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Plays a role in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex: phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; this phospho [...] (425 aa)
SSU72RNA polymerase II subunit A C-terminal domain phosphatase SSU72; May be involved in the C-terminal domain of RNA polymerase II dephosphorylation, RNA processing and termination; Belongs to the SSU72 phosphatase family. (194 aa)
ZC3H3Uncharacterized protein. (1007 aa)
WDR33WD_REPEATS_REGION domain-containing protein. (331 aa)
NUDT21Nudix hydrolase domain-containing protein. (473 aa)
CSTF2RRM domain-containing protein. (573 aa)
TMEM240Transmembrane protein 240. (149 aa)
CPSF4Uncharacterized protein. (243 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1690 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (691 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (582 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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