STRINGSTRING
SSU72 SSU72 CDC73 CDC73 CLP1 CLP1 PAPOLG PAPOLG CPSF2 CPSF2 SCAF8 SCAF8 FIP1L1 FIP1L1 TENT2 TENT2 CPSF3 CPSF3 PCF11 PCF11 APP APP PAF1 PAF1 PAPOLB PAPOLB WDR33 WDR33 TENT4B TENT4B LEO1 LEO1 ENSGALP00000056134 ENSGALP00000056134 FNDC10 FNDC10 ENSGALP00000066296 ENSGALP00000066296 TMEM240 TMEM240 MTPAP MTPAP CSTF2 CSTF2 NUDT21 NUDT21 PNPT1 PNPT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SSU72RNA polymerase II subunit A C-terminal domain phosphatase SSU72; May be involved in the C-terminal domain of RNA polymerase II dephosphorylation, RNA processing and termination; Belongs to the SSU72 phosphatase family. (194 aa)
CDC73Parafibromin; Tumor suppressor probably involved in transcriptional and post-transcriptional control pathways. May be involved in cell cycle progression through the regulation of cyclin D1/PRAD1 expression. Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II. PAF1C associates with RNA polymerase II, is involved in transcriptional elongation and in histone modifications including methylation on histone H3 'Lys-4' (H3K4me3) (By similarity). (531 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Plays a role in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex: phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; this phospho [...] (425 aa)
PAPOLGPoly(A) polymerase gamma. (722 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
SCAF8SR-related CTD associated factor 8. (1301 aa)
FIP1L1Fip1 domain-containing protein. (545 aa)
TENT2Terminal nucleotidyltransferase 2. (499 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (691 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1690 aa)
APPBPTI/Kunitz inhibitor domain-containing protein. (751 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (488 aa)
PAPOLBPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (737 aa)
WDR33WD_REPEATS_REGION domain-containing protein. (331 aa)
TENT4BTerminal nucleotidyltransferase 4B. (684 aa)
LEO1Uncharacterized protein. (657 aa)
ENSGALP00000056134Uncharacterized protein. (348 aa)
FNDC10Fibronectin type III domain containing 10. (215 aa)
ENSGALP00000066296Uncharacterized protein. (471 aa)
TMEM240Transmembrane protein 240. (149 aa)
MTPAPMitochondrial poly(A) polymerase. (577 aa)
CSTF2RRM domain-containing protein. (573 aa)
NUDT21Nudix hydrolase domain-containing protein. (473 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (896 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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