STRINGSTRING
CPSF2 CPSF2 CPSF4L CPSF4L CPSF4 CPSF4 FIP1L1 FIP1L1 PCF11 PCF11 CPSF6 CPSF6 POLR2I POLR2I CPSF7 CPSF7 CSTF2 CSTF2 NUDT21 NUDT21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF4LUncharacterized protein. (193 aa)
CPSF4Uncharacterized protein. (243 aa)
FIP1L1Fip1 domain-containing protein. (545 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1690 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (582 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (533 aa)
CSTF2RRM domain-containing protein. (573 aa)
NUDT21Nudix hydrolase domain-containing protein. (473 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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