(9 nodes) CoA carboxylase activity network (Gallus gallus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MCCC1	Uncharacterized protein. (758 aa)
	MCCC2	Methylcrotonoyl-CoA carboxylase 2. (560 aa)
	MCCC2L	Uncharacterized protein. (606 aa)
	PCCA	Propionyl-CoA carboxylase subunit alpha. (713 aa)
	ACACA	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase. (2355 aa)
	PCCB	Propionyl-CoA carboxylase subunit beta. (529 aa)
	ENSGALP00000051771	Biotin carboxylation domain-containing protein. (177 aa)
	ACACB	Uncharacterized protein. (879 aa)
	ENSGALP00000073118	ACC_central domain-containing protein. (87 aa)

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACACA	ACACB	ENSGALP00000043760	ENSGALP00000058059	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	Uncharacterized protein.	0.902
ACACA	MCCC1	ENSGALP00000043760	ENSGALP00000032512	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	Uncharacterized protein.	0.514
ACACA	MCCC2	ENSGALP00000043760	ENSGALP00000003974	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	Methylcrotonoyl-CoA carboxylase 2.	0.491
ACACA	MCCC2L	ENSGALP00000043760	ENSGALP00000018342	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	Uncharacterized protein.	0.491
ACACA	PCCA	ENSGALP00000043760	ENSGALP00000027209	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	Propionyl-CoA carboxylase subunit alpha.	0.496
ACACA	PCCB	ENSGALP00000043760	ENSGALP00000045840	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	Propionyl-CoA carboxylase subunit beta.	0.544
ACACB	ACACA	ENSGALP00000058059	ENSGALP00000043760	Uncharacterized protein.	Acetyl-CoA carboxylase; Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.	0.902
ACACB	ENSGALP00000051771	ENSGALP00000058059	ENSGALP00000051771	Uncharacterized protein.	Biotin carboxylation domain-containing protein.	0.900
ACACB	ENSGALP00000073118	ENSGALP00000058059	ENSGALP00000073118	Uncharacterized protein.	ACC_central domain-containing protein.	0.921
ACACB	MCCC1	ENSGALP00000058059	ENSGALP00000032512	Uncharacterized protein.	Uncharacterized protein.	0.940
ACACB	MCCC2	ENSGALP00000058059	ENSGALP00000003974	Uncharacterized protein.	Methylcrotonoyl-CoA carboxylase 2.	0.491
ACACB	MCCC2L	ENSGALP00000058059	ENSGALP00000018342	Uncharacterized protein.	Uncharacterized protein.	0.491
ACACB	PCCA	ENSGALP00000058059	ENSGALP00000027209	Uncharacterized protein.	Propionyl-CoA carboxylase subunit alpha.	0.954
ACACB	PCCB	ENSGALP00000058059	ENSGALP00000045840	Uncharacterized protein.	Propionyl-CoA carboxylase subunit beta.	0.493
ENSGALP00000051771	ACACB	ENSGALP00000051771	ENSGALP00000058059	Biotin carboxylation domain-containing protein.	Uncharacterized protein.	0.900
ENSGALP00000051771	ENSGALP00000073118	ENSGALP00000051771	ENSGALP00000073118	Biotin carboxylation domain-containing protein.	ACC_central domain-containing protein.	0.899
ENSGALP00000051771	MCCC1	ENSGALP00000051771	ENSGALP00000032512	Biotin carboxylation domain-containing protein.	Uncharacterized protein.	0.468
ENSGALP00000051771	MCCC2	ENSGALP00000051771	ENSGALP00000003974	Biotin carboxylation domain-containing protein.	Methylcrotonoyl-CoA carboxylase 2.	0.491
ENSGALP00000051771	MCCC2L	ENSGALP00000051771	ENSGALP00000018342	Biotin carboxylation domain-containing protein.	Uncharacterized protein.	0.491
ENSGALP00000051771	PCCA	ENSGALP00000051771	ENSGALP00000027209	Biotin carboxylation domain-containing protein.	Propionyl-CoA carboxylase subunit alpha.	0.468