STRINGSTRING
SCARB1 SCARB1 NOD1 NOD1 PGLYRP2 PGLYRP2 COLEC12 COLEC12 TLR4 TLR4 PTAFR PTAFR TLR7 TLR7 LY96 LY96
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCARB1Scavenger receptor class B member 1; Belongs to the CD36 family. (503 aa)
NOD1Uncharacterized protein. (951 aa)
PGLYRP2Uncharacterized protein. (496 aa)
COLEC12Collectin-12; Scavenger receptor that displays several functions associated with host defense. Binds to carbohydrates (By similarity). (892 aa)
TLR4Toll-like receptor 4; Belongs to the Toll-like receptor family. (843 aa)
PTAFRPlatelet activating factor receptor; Belongs to the G-protein coupled receptor 1 family. (348 aa)
TLR7Toll-like receptor 7; Belongs to the Toll-like receptor family. (1059 aa)
LY96Lymphocyte antigen 96. (155 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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