STRINGSTRING
WNT11 WNT11 STRA6 STRA6 DNAAF1 DNAAF1 LOC427439 LOC427439 HNF1B HNF1B PKD1 PKD1 CRKL CRKL CLMP CLMP CLDN18 CLDN18 CCDC40 CCDC40 LOC430697 LOC430697 PKDCCB PKDCCB IHH IHH IL8L1 IL8L1 SAV1 SAV1 BMP4 BMP4 BCL2 BCL2 AHI1 AHI1 IL6ST IL6ST IFT172 IFT172 KLF5 KLF5 TGFB2 TGFB2 EDNRB EDNRB TGFB3 TGFB3 SOX9 SOX9 TIGAR TIGAR TCF21 TCF21 CTNNB1 CTNNB1 PITX2 PITX2 PKDCC PKDCC FOXF1 FOXF1 NKX2-3 NKX2-3 NKX2-6 NKX2-6 SMO SMO COBL COBL LGR4 LGR4 FOXF2 FOXF2 KIT KIT YIPF6 YIPF6 LOC427025 LOC427025 RBPMS2 RBPMS2 PDX1 PDX1 RARRES2 RARRES2 HLX HLX TP63 TP63 HOXA5 HOXA5 NKX3-2 NKX3-2 C1GALT1 C1GALT1 MYOCD MYOCD CCDC103 CCDC103 RB1 RB1 KCNQ1 KCNQ1 EDNRB2 EDNRB2 PRDM1 PRDM1 EPB41L5 EPB41L5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WNT11Protein Wnt-11; Ligand for members of the frizzled family of seven transmembrane receptors. May play a role in the formation of dermal structure, both limb and feather buds. Is likely to signal over only few cell diameters. (354 aa)
STRA6Uncharacterized protein. (671 aa)
DNAAF1Dynein assembly factor 1, axonemal. (516 aa)
LOC427439Nipped-B protein. (2783 aa)
HNF1BHNF1 homeobox B. (531 aa)
PKD1Polycystin 1, transient receptor potential channel interacting. (4382 aa)
CRKLCRK like proto-oncogene, adaptor protein. (193 aa)
CLMPCXADR like membrane protein. (411 aa)
CLDN18Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (358 aa)
CCDC40Coiled-coil domain containing 40. (931 aa)
LOC430697Uncharacterized protein. (393 aa)
PKDCCBPIP49_C domain-containing protein. (378 aa)
IHHIndian hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Binds to the patched (PTC) receptor, which functions in association with smoothened (SMO), to activate the transcription of target genes. Implicated in endochondral ossification: may regulate the balance between growth and ossification of the developing bones. Induces the expression of parathyroid hormone-related protein (PTHRP); Belongs to the hedgehog family. (408 aa)
IL8L1Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family. (104 aa)
SAV1Salvador family WW domain containing protein 1. (385 aa)
BMP4Bone morphogenetic protein 4; Negatively regulates the structure and function of the limb apical ectodermal ridge. (404 aa)
BCL2Apoptosis regulator Bcl-2; Suppresses apoptosis in a variety of cell systems including factor-dependent lymphohematopoietic and neural cells. Regulates cell death by controlling the mitochondrial membrane permeability. Appears to function in a feedback loop system with caspases. Inhibits caspase activity either by preventing the release of cytochrome c from the mitochondria and/or by binding to the apoptosis-activating factor (APAF-1). (233 aa)
AHI1Abelson helper integration site 1. (1242 aa)
IL6STGlycoprotein 130. (918 aa)
IFT172Intraflagellar transport 172. (1749 aa)
KLF5Kruppel like factor 5. (441 aa)
TGFB2Transforming growth factor beta-2 proprotein; Transforming growth factor beta-2 proprotein: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-2 (TGF-beta-2) chains, which constitute the regulatory and active subunit of TGF-beta-2, respectively. Transforming growth factor beta-2: Multifunctional protein that regulates various processes such as angiogenesis and heart development (By similarity). Activation into mature form follows different steps: following cleavage of the proprotein in the Golgi apparatus, Latency-associated peptide (LAP) and Transfor [...] (412 aa)
EDNRBG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (560 aa)
TGFB3Transforming growth factor beta-3 proprotein; Transforming growth factor beta-3 proprotein: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-3 (TGF-beta-3) chains, which constitute the regulatory and active subunit of TGF-beta-3, respectively. Transforming growth factor beta-3: Multifunctional protein that regulates embryogenesis and cell differentiation and is required in various processes such as secondary palate development (By similarity). Activation into mature form follows different steps: following cleavage of the proprotein in the Golgi appa [...] (535 aa)
SOX9Transcription factor SOX-9; Transcription factor that selectively activates enhancer through its interaction with a DNA-binding partner factor. Activates enhancer of COL2A1 through its binding with DNA sequence 5'-ATTCAT-3'. In response to bone morphogenetic protein stimulus, phosphorylation is induced and then sumoylation, allowing cooperation with SNAI2 to trigger neural crest delamination. Functions at the level of mesenchymal cell condensation by inducing cartilage development in limbs and by changing the aggregation properties of limb mesenchymal cells. Regulates the cell fate dec [...] (494 aa)
TIGARTIGAR. (280 aa)
TCF21BHLH domain-containing protein. (179 aa)
CTNNB1Uncharacterized protein. (781 aa)
PITX2Pituitary homeobox 2; May play an important role in development and maintenance of anterior structures. May play a role in determining left-right asymmetry and in vasculogenesis during avian embryogenesis. (333 aa)
PKDCCProtein kinase domain containing, cytoplasmic. (496 aa)
FOXF1Forkhead box F1. (407 aa)
NKX2-3Homeobox domain-containing protein. (328 aa)
NKX2-6Homeobox domain-containing protein. (193 aa)
SMOSmoothened homolog; G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO). (816 aa)
COBLCordon-bleu WH2 repeat protein. (1412 aa)
LGR4Leucine rich repeat containing G protein-coupled receptor 4. (952 aa)
FOXF2Forkhead box F2. (389 aa)
KITMast/stem cell growth factor receptor Kit; Tyrosine-protein kinase that acts as cell-surface receptor for the cytokine KITLG/SCF and plays an essential role in the regulation of cell survival and proliferation, hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, migration and function, and in melanogenesis. In response to KITLG/SCF binding, KIT can activate several signaling pathways. Promotes phosphorylation of PIK3R1, the regulatory subunit of phosphatidylinositol 3-kinase, and subsequent activation of the kinase AKT1. Activated KIT also transmits signals via [...] (960 aa)
YIPF6Protein YIPF. (231 aa)
LOC427025Nipped-B protein. (2769 aa)
RBPMS2RNA-binding protein with multiple splicing 2; RNA-binding protein involved in the regulation of smooth muscle cell differentiation and proliferation in the gastrointestinal system. Binds NOG mRNA, the major inhibitor of the bone morphogenetic protein (BMP) pathway. Mediates an increase of NOG mRNA levels, thereby contributing to the negative regulation of BMP signaling pathway and promoting reversible dedifferentiation and proliferation of smooth muscle cells. (200 aa)
PDX1Homeobox domain-containing protein. (259 aa)
RARRES2Chemerin. (162 aa)
HLXH2.0 like homeobox. (431 aa)
TP63Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. (680 aa)
HOXA5Homeobox protein Hox-A5; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Also binds to its own promoter. Binds specifically to the motif 5'-CYYNATTA[TG]Y-3' (By similarity); Belongs to the Antp homeobox family. (318 aa)
NKX3-2Homeobox domain-containing protein. (275 aa)
C1GALT1Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily. (372 aa)
MYOCDPhosphatase and actin regulator. (908 aa)
CCDC103Coiled-coil domain containing 103. (192 aa)
RB1Retinoblastoma-associated protein; Key regulator of entry into cell division that acts as a tumor suppressor. Acts as a transcription repressor of E2F1 target genes. Directly involved in heterochromatin formation by maintaining overall chromatin structure and, in particular, that of constitutive heterochromatin by stabilizing histone methylation. Recruits and targets histone methyltransferases SUV39H1, KMT5B and KMT5C, leading to epigenetic transcriptional repression. Controls histone H4 'Lys-20' trimethylation. Also acts as a transcription repressor of E2F target genes by recruiting c [...] (984 aa)
KCNQ1Potassium voltage-gated channel subfamily Q member 1; Belongs to the potassium channel family. (863 aa)
EDNRB2G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (479 aa)
PRDM1PR/SET domain 1. (789 aa)
EPB41L5Erythrocyte membrane protein band 4.1 like 5. (766 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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