STRINGSTRING
GFAP GFAP NPTN NPTN LRRTM2 LRRTM2 SYT12 SYT12 TSHZ3 TSHZ3 SERPINE2 SERPINE2 GRIN2A GRIN2A SLC24A1 SLC24A1 SNAP25 SNAP25 GRIN2B GRIN2B LRRTM1 LRRTM1 GRIN2C GRIN2C SHANK2 SHANK2 SLC24A2 SLC24A2 SNAP47 SNAP47 MECP2 MECP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GFAPGlial fibrillary acidic protein; Belongs to the intermediate filament family. (422 aa)
NPTNUncharacterized protein. (397 aa)
LRRTM2Leucine rich repeat transmembrane neuronal 2. (515 aa)
SYT12C2 domain-containing protein. (417 aa)
TSHZ3Teashirt zinc finger homeobox 3. (1079 aa)
SERPINE2SERPIN domain-containing protein; Belongs to the serpin family. (442 aa)
GRIN2AGlutamate ionotropic receptor NMDA type subunit 2A. (1458 aa)
SLC24A1Sodium/potassium/calcium exchanger 1; Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+). (663 aa)
SNAP25Synaptosomal-associated protein 25; t-SNARE involved in the molecular regulation of neurotransmitter release. May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion (By similarity). Belongs to the SNAP-25 family. (206 aa)
GRIN2BGlutamate ionotropic receptor NMDA type subunit 2B. (1504 aa)
LRRTM1Leucine rich repeat transmembrane neuronal 1. (521 aa)
GRIN2CGlutamate ionotropic receptor NMDA type subunit 2C. (1301 aa)
SHANK2SH3 and multiple ankyrin repeat domains 2. (1462 aa)
SLC24A2Sodium/potassium/calcium exchanger 2; Critical component of the visual transduction cascade, controlling the calcium concentration of outer segments during light and darkness. Light causes a rapid lowering of cytosolic free calcium in the outer segment of both retinal rod and cone photoreceptors and the light-induced lowering of calcium is caused by extrusion via this protein which plays a key role in the process of light adaptation. Transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+); Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. SLC24A subfamily. (651 aa)
SNAP47Synaptosome associated protein 47. (461 aa)
MECP2Methyl-CpG binding protein 2. (208 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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