STRINGSTRING
FHDC1 FHDC1 VAMP4 VAMP4 GOLPH3 GOLPH3 GCC2 GCC2 OPTN OPTN TRIP11 TRIP11 ENSGALP00000066493 ENSGALP00000066493 VTI1A VTI1A STX10 STX10 ENSGALP00000068544 ENSGALP00000068544 STX16 STX16 LOC107049174 LOC107049174
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FHDC1FH2 domain-containing protein. (741 aa)
VAMP4Vesicle associated membrane protein 4. (141 aa)
GOLPH3Uncharacterized protein. (294 aa)
GCC2GRIP and coiled-coil domain containing 2. (1693 aa)
OPTNOptineurin; Probably part of the TNF-alpha signaling pathway that can shift the equilibrium toward induction of cell death. May act by regulating membrane trafficking and cellular morphogenesis. May act as autophagy receptor that interacts directly with both the cargo to become degraded and an autophagy modifier of the MAP1 LC3 family. (557 aa)
TRIP11Thyroid hormone receptor interactor 11. (1980 aa)
ENSGALP00000066493FH2 domain-containing protein. (168 aa)
VTI1At-SNARE coiled-coil homology domain-containing protein. (224 aa)
STX10Syntaxin-6; Involved in intracellular vesicle trafficking; Belongs to the syntaxin family. (254 aa)
ENSGALP00000068544Uncharacterized protein. (132 aa)
STX16t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (326 aa)
LOC107049174Uncharacterized protein. (293 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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