STRINGSTRING
POP4 POP4 SPO11 SPO11 KIAA0391 KIAA0391 RRS1 RRS1 DCP2 DCP2 RAD51C RAD51C PAN3 PAN3 MGME1 MGME1 ZC3H12A ZC3H12A TTC38L TTC38L FEN1 FEN1 CNOT6 CNOT6 EDC4 EDC4 ZC3H12D ZC3H12D C12orf10 C12orf10 EXOSC7 EXOSC7 EDC3 EDC3 DFFB DFFB MEI4 MEI4 NOCT NOCT ENDOUL ENDOUL AGO2 AGO2 MARF1 MARF1 NOL9 NOL9 XPA XPA DROSHA DROSHA ENDOG ENDOG ERI2 ERI2 LOC422926 LOC422926 RNASE6 RNASE6 RAD50 RAD50 EXOSC9 EXOSC9 RNASET2 RNASET2 DICER1 DICER1 DNASE1L3 DNASE1L3 RPS21 RPS21 RSFR RSFR MEIOB MEIOB DCLRE1A DCLRE1A CL2 CL2 POLR3K POLR3K RPS3 RPS3 PCF11 PCF11 MRE11 MRE11 ENDOD1 ENDOD1 ZC3H12C ZC3H12C EXOSC8 EXOSC8 N4BP2L1 N4BP2L1 DIS3 DIS3 BIVM BIVM ERCC5 ERCC5 GEN1 GEN1 DDX1 DDX1 CPSF3 CPSF3 RNASEH1 RNASEH1 NUDT12 NUDT12 RCL1 RCL1 RBBP8 RBBP8 PELO PELO FIP1L1 FIP1L1 DCLRE1C DCLRE1C CNOT7 CNOT7 B4GALNT3 B4GALNT3 ZRANB3 ZRANB3 E1BQD2_CHICK E1BQD2_CHICK TSN TSN PLD4 PLD4 PNLDC1 PNLDC1 ERCC3 ERCC3 CPSF2 CPSF2 EXO1 EXO1 CNOT6L CNOT6L TOE1 TOE1 ERI3 ERI3 CNOT2 CNOT2 ANGEL2 ANGEL2 EXD2 EXD2 DNASE2B DNASE2B XRN2 XRN2 HARBI1 HARBI1 DIS3L2 DIS3L2 EME1 EME1 POLE POLE DIS3L DIS3L EXOG EXOG NTHL1 NTHL1 TBL3 TBL3 CPSF4 CPSF4 CPSF4L CPSF4L G3BP1 G3BP1 DNA2 DNA2 N4BP1 N4BP1 ERN1 ERN1 PMS2 PMS2 ATAD5 ATAD5 SMG6 SMG6 PARN PARN EXOSC10 EXOSC10 MRPL44 MRPL44 ERCC4 ERCC4 XRN1 XRN1 PIWIL1 PIWIL1 BMS1 BMS1 CNOT1 CNOT1 EME2 EME2 REXO5 REXO5 APTX APTX ELAC2 ELAC2 NOB1 NOB1 ENSGALP00000074161 ENSGALP00000074161 K123 K123 PNPT1 PNPT1 ENSGALP00000073911 ENSGALP00000073911 ENSGALP00000073877 ENSGALP00000073877 ENSGALP00000073842 ENSGALP00000073842 RIDA RIDA ENSGALP00000073783 ENSGALP00000073783 RNASEK RNASEK REXO4 REXO4 TSEN2 TSEN2 ENSGALP00000073693 ENSGALP00000073693 ANKLE1 ANKLE1 ENSGALP00000073491 ENSGALP00000073491 ANGEL1 ANGEL1 LOC101751955 LOC101751955 NUDT21 NUDT21 ENSGALP00000072652 ENSGALP00000072652 ENSGALP00000072585 ENSGALP00000072585 MBLAC1 MBLAC1 SETMAR SETMAR ENDOV ENDOV CSTF2 CSTF2 ISG20L2 ISG20L2 FAN1 FAN1 ENSGALP00000072078 ENSGALP00000072078 C19orf43 C19orf43 ENSGALP00000071693 ENSGALP00000071693 ENSGALP00000071601 ENSGALP00000071601 PLD6 PLD6 YBEY YBEY ENSGALP00000071349 ENSGALP00000071349 PDE12 PDE12 HELZ2 HELZ2 ENSGALP00000071169 ENSGALP00000071169 ENSGALP00000071149 ENSGALP00000071149 ENSGALP00000071051 ENSGALP00000071051 ENSGALP00000070953 ENSGALP00000070953 DCP1B DCP1B ENSGALP00000070777 ENSGALP00000070777 ENSGALP00000070549 ENSGALP00000070549 ENSGALP00000070412 ENSGALP00000070412 ENSGALP00000070408 ENSGALP00000070408 FANCM FANCM ENSGALP00000070057 ENSGALP00000070057 ENSGALP00000070027 ENSGALP00000070027 ENSGALP00000069880 ENSGALP00000069880 ENSGALP00000069848 ENSGALP00000069848 ENSGALP00000069784 ENSGALP00000069784 ENSGALP00000069775 ENSGALP00000069775 ENSGALP00000069752 ENSGALP00000069752 ENSGALP00000069664 ENSGALP00000069664 RPP38 RPP38 ASTE1 ASTE1 ISG20 ISG20 ENSGALP00000069413 ENSGALP00000069413 ENSGALP00000069360 ENSGALP00000069360 RPP30 RPP30 ENSGALP00000068909 ENSGALP00000068909 ENSGALP00000068883 ENSGALP00000068883 ENSGALP00000068826 ENSGALP00000068826 RNASEH2A RNASEH2A WRN WRN ENSGALP00000068712 ENSGALP00000068712 ENSGALP00000068331 ENSGALP00000068331 ENSGALP00000068288 ENSGALP00000068288 ENSGALP00000068244 ENSGALP00000068244 TDP1 TDP1 ENSGALP00000068125 ENSGALP00000068125 ENSGALP00000068066 ENSGALP00000068066 RPP25 RPP25 ENSGALP00000067823 ENSGALP00000067823 ENDOV-2 ENDOV-2 ENSGALP00000067774 ENSGALP00000067774 EXOSC3 EXOSC3 ENSGALP00000067720 ENSGALP00000067720 ENDOU ENDOU EXD3 EXD3 ENSGALP00000067483 ENSGALP00000067483 ENSGALP00000067351 ENSGALP00000067351 ZGRF1 ZGRF1 PLD3 PLD3 POL POL ENSGALP00000066651 ENSGALP00000066651 ENSGALP00000066368 ENSGALP00000066368 ENSGALP00000066301 ENSGALP00000066301 ENSGALP00000066147 ENSGALP00000066147 ENSGALP00000065485 ENSGALP00000065485 ENSGALP00000065219 ENSGALP00000065219 APLF APLF RPP14 RPP14 ENSGALP00000065021 ENSGALP00000065021 ENSGALP00000064923 ENSGALP00000064923 ENSGALP00000064916 ENSGALP00000064916 DNASE1L2 DNASE1L2 TDP2 TDP2 EXOSC2 EXOSC2 CNOT8 CNOT8 USB1 USB1 POP5 POP5 DNASE1 DNASE1 POLG POLG ENSGALP00000061451 ENSGALP00000061451 TATDN3 TATDN3 REXO2 REXO2 AGO4 AGO4 N4BP2 N4BP2 UTP23 UTP23 SWT1 SWT1 ENPP3 ENPP3 AGO1 AGO1 LAS1L LAS1L TTC38 TTC38 ZRANB3-2 ZRANB3-2 RAG1 RAG1 PAN2 PAN2 ENPP1 ENPP1 RAD1 RAD1 DBR1 DBR1 RPP40 RPP40 DCP1A DCP1A ENPP2 ENPP2 LACTB2 LACTB2 TATDN1 TATDN1 CPSF7 CPSF7 POLR2I POLR2I ERI1 ERI1 RNASEL RNASEL ZC3H12B ZC3H12B AGO3 AGO3 RRP36 RRP36 CPSF6 CPSF6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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POP4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (238 aa)
SPO11SPO11 initiator of meiotic double stranded breaks. (382 aa)
KIAA0391PRORP domain-containing protein. (591 aa)
RRS1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (357 aa)
DCP2Decapping mRNA 2. (416 aa)
RAD51CRAD51 paralog C. (360 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (687 aa)
MGME1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (342 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (681 aa)
TTC38LUncharacterized protein. (279 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (381 aa)
CNOT6CCR4-NOT transcription complex subunit 6. (557 aa)
EDC4Enhancer of mRNA decapping 4. (1403 aa)
ZC3H12DZinc finger CCCH-type containing 12D. (615 aa)
C12orf10Chromosome 12 open reading frame 10. (474 aa)
EXOSC7Uncharacterized protein. (291 aa)
EDC3Enhancer of mRNA-decapping protein 3; Binds single-stranded RNA. Involved in the process of mRNA degradation and in the positive regulation of mRNA decapping (By similarity). (506 aa)
DFFBCaspase-activated DNase. (333 aa)
MEI4Meiotic double-stranded break formation protein 4. (400 aa)
NOCTEndo/exonuclease/phosphatase domain-containing protein. (386 aa)
ENDOULXendoU domain-containing protein. (289 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (864 aa)
MARF1Meiosis regulator and mRNA stability factor 1; Essential regulator of oogenesis required for female meiotic progression to repress transposable elements and preventing their mobilization, which is essential for the germline integrity. (1741 aa)
NOL9Nucleolar protein 9. (588 aa)
XPADNA repair protein complementing XP-A cells homolog; Involved in DNA excision repair. Initiates repair by binding to damaged sites with various affinities, depending on the photoproduct and the transcriptional state of the region (By similarity). Belongs to the XPA family. (270 aa)
DROSHAUncharacterized protein. (1336 aa)
ENDOGEndonuclease G. (201 aa)
ERI2ERI1 exoribonuclease family member 2. (682 aa)
LOC422926Uncharacterized protein. (873 aa)
RNASE6Angiogenin; Binds to actin on the surface of endothelial cells; once bound, angiogenin is endocytosed and translocated to the nucleus. Stimulates ribosomal RNA synthesis including that containing the initiation site sequences of 45S rRNA. Cleaves tRNA within anticodon loops to produce tRNA-derived stress-induced fragments (tiRNAs) which inhibit protein synthesis and triggers the assembly of stress granules (SGs). Angiogenin induces vascularization of normal and malignant tissues. Angiogenic activity is regulated by interaction with RNH1 in vivo (By similarity). (139 aa)
RAD50Zinc-hook domain-containing protein. (1313 aa)
EXOSC9Polymyositis/scleroderma autoantigen 1. (440 aa)
RNASET2Uncharacterized protein; Belongs to the RNase T2 family. (266 aa)
DICER1Endoribonuclease Dicer; Double-stranded RNA (dsRNA) endoribonuclease playing a central role in short dsRNA-mediated post-transcriptional gene silencing. Cleaves naturally occurring long dsRNAs and short hairpin pre-microRNAs (miRNA) into fragments of twenty-one to twenty-three nucleotides with 3' overhang of two nucleotides, producing respectively short interfering RNAs (siRNA) and mature microRNAs. SiRNAs and miRNAs serve as guide to direct the RNA-induced silencing complex (RISC) to complementary RNAs to degrade them or prevent their translation. Gene silencing mediated by siRNAs, al [...] (1921 aa)
DNASE1L3Deoxyribonuclease; Belongs to the DNase I family. (307 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
RSFRRibonuclease homolog. (139 aa)
MEIOBMeiosis specific with OB-fold. (344 aa)
DCLRE1ADNA cross-link repair 1A protein; May be required for DNA interstrand cross-link repair. (972 aa)
CL2Ribonuclease CL2; Pyrimidine-specific nuclease with preference for C; Belongs to the pancreatic ribonuclease family. (145 aa)
POLR3KDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
RPS3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (243 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1690 aa)
MRE11Double-strand break repair protein MRE11; Component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. The complex possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity, which are provided by MRE11. RAD50 may be required to bind DNA ends and hold them in close proximity. This could facilitate searches for short or long regions of sequence homology in the recombining DNA templates, and may also stimulate the activity of DNA ligases and/or restr [...] (709 aa)
ENDOD1Endonuclease domain containing 1. (480 aa)
ZC3H12CZinc finger CCCH-type containing 12C. (857 aa)
EXOSC8Exosome component 8. (283 aa)
N4BP2L1Uncharacterized protein. (217 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (997 aa)
BIVMUncharacterized protein. (505 aa)
ERCC5Uncharacterized protein. (1118 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (941 aa)
DDX1ATP-dependent RNA helicase DDX1; Acts as an ATP-dependent RNA helicase, able to unwind both RNA-RNA and RNA-DNA duplexes. Possesses 5' single-stranded RNA overhang nuclease activity. Acts as a positive regulator of transcription. May be involved in 3'-end cleavage and polyadenylation of pre-mRNAs. Binds DNA and RNA. Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RTCB (By similarity). Binds (via helicase ATP-binding domain) on both short and long poly(I:C) dsRNA (By similarity). (740 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (691 aa)
RNASEH1Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (293 aa)
NUDT12Nudix hydrolase 12. (465 aa)
RCL1RNA terminal phosphate cyclase like 1. (374 aa)
RBBP8RB binding protein 8, endonuclease. (912 aa)
PELOIntegrin alpha-1; Integrin alpha-1/beta-1 is a receptor for laminin and collagen. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Involved in anchorage-dependent, negative regulation of EGF-stimulated cell growth (By similarity). (1175 aa)
FIP1L1Fip1 domain-containing protein. (545 aa)
DCLRE1CProtein artemis; Required for V(D)J recombination, the process by which exons encoding the antigen-binding domains of immunoglobulins and T-cell receptor proteins are assembled from individual V, (D), and J gene segments. V(D)J recombination is initiated by the lymphoid specific RAG endonuclease complex, which generates site specific DNA double strand breaks (DSBs). These DSBs present two types of DNA end structures: hairpin sealed coding ends and phosphorylated blunt signal ends. These ends are independently repaired by the non homologous end joining (NHEJ) pathway to form coding and [...] (714 aa)
CNOT7CCR4-NOT transcription complex subunit 7; Has 3'-5' poly(A) exoribonuclease activity for synthetic poly(A) RNA substrate. Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA- mediated repression, translational repression during translational initiation and general transcription regulation. During miRNA-mediated repression the complex seems also to act as translational repressor during translational initiation. Additional complex functions may be a consequence [...] (285 aa)
B4GALNT3Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans. (1064 aa)
ZRANB3Zinc finger RANBP2-type containing 3. (420 aa)
E1BQD2_CHICKAAA_12 domain-containing protein. (229 aa)
TSNTranslin; DNA-binding protein that specifically recognizes consensus sequences at the breakpoint junctions in chromosomal translocations, mostly involving immunoglobulin (Ig)/T-cell receptor gene segments. Seems to recognize single-stranded DNA ends generated by staggered breaks occurring at recombination hot spots (By similarity). Belongs to the translin family. (229 aa)
PLD4Phospholipase D family member 4. (514 aa)
PNLDC1PARN like, ribonuclease domain containing 1. (509 aa)
ERCC3General transcription and DNA repair factor IIH helicase subunit XPB; ATP-dependent 3'-5' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATPase activity of XPB/ERCC3, but not its helicase activity, is required fo [...] (780 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
EXO1Uncharacterized protein. (800 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (607 aa)
TOE1Target of EGR1, exonuclease. (534 aa)
ERI3ERI1 exoribonuclease family member 3. (244 aa)
CNOT2NOT2_3_5 domain-containing protein. (520 aa)
ANGEL2Endo/exonuclease/phosphatase domain-containing protein. (681 aa)
EXD23'-5' exonuclease domain-containing protein. (621 aa)
DNASE2BUncharacterized protein. (381 aa)
XRN25'-3' exoribonuclease 2; Possesses 5'->3' exoribonuclease activity. May promote the termination of transcription by RNA polymerase II (By similarity). Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily. (949 aa)
HARBI1Harbinger transposase derived 1. (348 aa)
DIS3L2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1128 aa)
EME1Essential meiotic structure-specific endonuclease 1. (568 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2290 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1054 aa)
EXOGExo/endonuclease G. (382 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (281 aa)
TBL3WD_REPEATS_REGION domain-containing protein. (812 aa)
CPSF4Uncharacterized protein. (243 aa)
CPSF4LUncharacterized protein. (193 aa)
G3BP1Uncharacterized protein. (472 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2; Key enzyme involved in DNA replication and DNA repair in nucleus and mitochondrion. Involved in Okazaki fragments processing by cleaving long flaps that escape FEN1: flaps that are longer than 27 nucleotides are coated by replication protein A complex (RPA), leading to recruit DNA2 which cleaves the flap until it is too short to bind RPA and becomes a substrate for FEN1. Also involved in 5'-end resection of DNA during double-strand break (DSB) repair by mediating the cleavage of 5'-ssDNA, while the 3'-ssDNA cleavage is prevented by [...] (992 aa)
N4BP1NEDD4-binding protein 1; Inhibitor of the E3 ubiquitin-protein ligase ITCH. Belongs to the N4BP1 family. (930 aa)
ERN1Uncharacterized protein. (968 aa)
PMS2Mismatch repair endonuclease PMS2; Component of the post-replicative DNA mismatch repair system (MMR). Involved in B cell growth by positively regulating B cell proliferation and controlling replication efficiency. Controls cell cycle to prevent re-replication and defects in DNA damage-induced G2 checkpoint. Doesn't seem to counteract or control the immunoglobulin gene conversion (Ig GC) and to contribute to guanine/uracil mismatch repair. (869 aa)
ATAD5AAA domain-containing protein. (1816 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1452 aa)
PARNR3H domain-containing protein. (635 aa)
EXOSC10HRDC domain-containing protein. (910 aa)
MRPL44Uncharacterized protein. (326 aa)
ERCC4ERCC4 domain-containing protein. (903 aa)
XRN15'-3' exoribonuclease 1. (1770 aa)
PIWIL1Piwi-like protein 1; Endoribonuclease that plays a central role in postnatal germ cells by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons. Directly binds methylated piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived fro [...] (867 aa)
BMS1Bms1-type G domain-containing protein. (1299 aa)
CNOT1Uncharacterized protein. (2376 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (273 aa)
REXO5Uncharacterized protein. (773 aa)
APTXAprataxin; DNA-binding protein involved in single-strand DNA break repair, double-strand DNA break repair and base excision repair. Resolves abortive DNA ligation intermediates formed either at base excision sites, or when DNA ligases attempt to repair non-ligatable breaks induced by reactive oxygen species. Catalyzes the release of adenylate groups covalently linked to 5'-phosphate termini, resulting in the production of 5'-phosphate termini that can be efficiently rejoined. Also able to hydrolyze adenosine 5'- monophosphoramidate (AMP-NH(2)) and diadenosine tetraphosphate (AppppA), b [...] (350 aa)
ELAC2ElaC ribonuclease Z 2. (842 aa)
NOB1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (426 aa)
ENSGALP00000074161Uncharacterized protein. (696 aa)
K123K123 protein. (276 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (896 aa)
ENSGALP00000073911Uncharacterized protein. (1017 aa)
ENSGALP00000073877Uncharacterized protein. (1017 aa)
ENSGALP00000073842Uncharacterized protein. (711 aa)
RIDAReactive intermediate imine deaminase A homolog. (286 aa)
ENSGALP00000073783Uncharacterized protein. (744 aa)
RNASEKRibonuclease K. (130 aa)
REXO4REX4 homolog, 3'-5' exonuclease. (172 aa)
TSEN2tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (461 aa)
ENSGALP00000073693Uncharacterized protein. (1017 aa)
ANKLE1Ankyrin repeat and LEM domain containing 1. (609 aa)
ENSGALP00000073491Uncharacterized protein. (827 aa)
ANGEL1Endo/exonuclease/phosphatase domain-containing protein. (704 aa)
LOC101751955DDE Tnp4 domain-containing protein. (736 aa)
NUDT21Nudix hydrolase domain-containing protein. (473 aa)
ENSGALP00000072652Uncharacterized protein. (438 aa)
ENSGALP00000072585Uncharacterized protein. (236 aa)
MBLAC1Metallo-beta-lactamase domain containing 1. (369 aa)
SETMARUncharacterized protein. (297 aa)
ENDOVEndonuclease V. (202 aa)
CSTF2RRM domain-containing protein. (573 aa)
ISG20L2Interferon stimulated exonuclease gene 20 like 2. (303 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1034 aa)
ENSGALP00000072078Uncharacterized protein. (927 aa)
C19orf43Uncharacterized protein. (232 aa)
ENSGALP00000071693Uncharacterized protein. (697 aa)
ENSGALP00000071601Reverse transcriptase domain-containing protein. (127 aa)
PLD6Phospholipase D family member 6. (218 aa)
YBEYYbeY metalloendoribonuclease. (164 aa)
ENSGALP00000071349AAA_11 domain-containing protein. (258 aa)
PDE12Phosphodiesterase 12. (584 aa)
HELZ2Helicase with zinc finger 2. (2818 aa)
ENSGALP00000071169Smr domain-containing protein. (223 aa)
ENSGALP00000071149annotation not available (1017 aa)
ENSGALP00000071051Uncharacterized protein. (696 aa)
ENSGALP00000070953Uncharacterized protein. (1017 aa)
DCP1BDecapping mRNA 1B. (606 aa)
ENSGALP00000070777Uncharacterized protein. (191 aa)
ENSGALP00000070549Uncharacterized protein. (696 aa)
ENSGALP00000070412Reverse transcriptase domain-containing protein. (297 aa)
ENSGALP00000070408Reverse transcriptase domain-containing protein. (347 aa)
FANCMFanconi anemia group M protein; DNA-dependent ATPase component of the Fanconi anemia (FA) core complex (By similarity). Required for the normal activation of the FA pathway, leading to monoubiquitination of the FANCI-FANCD2 complex in response to DNA damage, cellular resistance to DNA cross-linking drugs, and prevention of chromosomal breakage. In complex with CENPS and CENPX, binds double- stranded DNA (dsDNA), fork-structured DNA (fsDNA) and Holliday junction substrates (By similarity). Its ATP-dependent DNA branch migration activity can process branched DNA structures such as a mova [...] (2101 aa)
ENSGALP00000070057Reverse transcriptase domain-containing protein. (915 aa)
ENSGALP00000070027Uncharacterized protein. (523 aa)
ENSGALP00000069880Uncharacterized protein. (948 aa)
ENSGALP00000069848Uncharacterized protein. (481 aa)
ENSGALP00000069784Uncharacterized protein. (1017 aa)
ENSGALP00000069775Uncharacterized protein. (1024 aa)
ENSGALP00000069752Uncharacterized protein. (371 aa)
ENSGALP00000069664Uncharacterized protein. (696 aa)
RPP38Ribosomal_L7Ae domain-containing protein. (332 aa)
ASTE1Uncharacterized protein. (215 aa)
ISG20Interferon stimulated exonuclease gene 20. (258 aa)
ENSGALP00000069413Uncharacterized protein. (930 aa)
ENSGALP00000069360annotation not available (1017 aa)
RPP30Ribonuclease P/MRP subunit p30. (363 aa)
ENSGALP00000068909Uncharacterized protein. (355 aa)
ENSGALP00000068883Uncharacterized protein. (552 aa)
ENSGALP00000068826annotation not available (1017 aa)
RNASEH2ARibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (477 aa)
WRNUncharacterized protein. (1622 aa)
ENSGALP00000068712Uncharacterized protein. (1017 aa)
ENSGALP00000068331Uncharacterized protein. (387 aa)
ENSGALP00000068288Uncharacterized protein. (65 aa)
ENSGALP00000068244PLD phosphodiesterase domain-containing protein. (380 aa)
TDP1Tyrosyl-DNA phosphodiesterase 1. (617 aa)
ENSGALP00000068125annotation not available (1017 aa)
ENSGALP00000068066TNase-like domain-containing protein. (231 aa)
RPP25Ribonuclease P and MRP subunit p25. (203 aa)
ENSGALP00000067823Integrase catalytic domain-containing protein. (123 aa)
ENDOV-2Uncharacterized protein. (238 aa)
ENSGALP00000067774Uncharacterized protein. (696 aa)
EXOSC3KH_dom_type_1 domain-containing protein. (288 aa)
ENSGALP00000067720annotation not available (523 aa)
ENDOUEndonuclease, poly(U) specific. (356 aa)
EXD3Exonuclease 3'-5' domain containing 3. (872 aa)
ENSGALP00000067483Uncharacterized protein. (1017 aa)
ENSGALP00000067351Uncharacterized protein. (1017 aa)
ZGRF1DUF2439 domain-containing protein. (1061 aa)
PLD3PLD phosphodiesterase domain-containing protein. (204 aa)
POLRetrovirus-related Pol polyprotein. (809 aa)
ENSGALP00000066651Uncharacterized protein. (696 aa)
ENSGALP00000066368Uncharacterized protein. (521 aa)
ENSGALP00000066301Uncharacterized protein. (573 aa)
ENSGALP00000066147Uncharacterized protein. (1017 aa)
ENSGALP00000065485GIY-YIG domain-containing protein. (71 aa)
ENSGALP00000065219Uncharacterized protein. (1017 aa)
APLFUncharacterized protein. (531 aa)
RPP14Ribonuclease P/MRP subunit p14. (134 aa)
ENSGALP00000065021Reverse transcriptase domain-containing protein. (604 aa)
ENSGALP00000064923Reverse transcriptase domain-containing protein. (360 aa)
ENSGALP00000064916Uncharacterized protein. (726 aa)
DNASE1L2Deoxyribonuclease; Belongs to the DNase I family. (278 aa)
TDP2Tyrosyl-DNA phosphodiesterase 2; DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead- end complexes between DNA and the topoisomerase 2 (TOP2) active site tyrosine residue. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DNA double-strand breaks (DSBs) due to DNA damage by radiation and free radicals. The 5'-tyrosyl DNA phosphodiesterase activity can enable the repair of TOP2-induced DSBs without the need for nuclease activity, crea [...] (369 aa)
EXOSC2S1 domain-containing protein. (294 aa)
CNOT8Uncharacterized protein. (292 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (398 aa)
POP5POP5 homolog, ribonuclease P/MRP subunit. (281 aa)
DNASE1Deoxyribonuclease-1; Serum endocuclease secreted into body fluids by a wide variety of exocrine and endocrine organs. Expressed by non-hematopoietic tissues and preferentially cleaves protein-free DNA (By similarity). Among other functions, seems to be involved in cell death by apoptosis (By similarity). Binds specifically to G-actin and blocks actin polymerization (By similarity). (282 aa)
POLGDNA polymerase subunit gamma-1; Involved in the replication of mitochondrial DNA. Associates with mitochondrial DNA (By similarity). (1191 aa)
ENSGALP00000061451Uncharacterized protein. (255 aa)
TATDN3TatD DNase domain containing 3. (261 aa)
REXO2Exonuclease domain-containing protein. (233 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (861 aa)
N4BP2Uncharacterized protein. (261 aa)
UTP23UTP23 small subunit processome component. (246 aa)
SWT1SWT1 RNA endoribonuclease homolog. (861 aa)
ENPP3Ectonucleotide pyrophosphatase/phosphodiesterase 3. (886 aa)
AGO1Uncharacterized protein; Belongs to the argonaute family. (857 aa)
LAS1LLAS1 like, ribosome biogenesis factor. (626 aa)
TTC38Uncharacterized protein. (466 aa)
ZRANB3-2HNH domain-containing protein. (442 aa)
RAG1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break b [...] (1041 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1439 aa)
ENPP1Uncharacterized protein. (354 aa)
RAD1RAD1 checkpoint DNA exonuclease. (281 aa)
DBR1Lariat debranching enzyme; Cleaves the 2'-5' phosphodiester linkage at the branch point of lariat intron pre-mRNAs after splicing and converts them into linear molecules that are subsequently degraded. It thereby facilitates ribonucleotide turnover. It may also participate in retrovirus replication via an RNA lariat intermediate in cDNA synthesis (By similarity); Belongs to the lariat debranching enzyme family. (486 aa)
RPP40Ribonuclease P/MRP subunit p40. (362 aa)
DCP1ADecapping mRNA 1A. (582 aa)
ENPP2Uncharacterized protein. (859 aa)
LACTB2Lactamase_B domain-containing protein. (264 aa)
TATDN1TatD DNase domain containing 1. (297 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (533 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
ERI1SAP domain-containing protein. (327 aa)
RNASELUncharacterized protein. (686 aa)
ZC3H12BZinc finger CCCH-type containing 12B. (837 aa)
AGO3Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Possesses RNA slicer activity but only on select RNAs bearing 5'- and 3'-flanking sequences to the region of guide-target complementarity. (860 aa)
RRP36Uncharacterized protein. (202 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (582 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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