STRINGSTRING
IFFO1 IFFO1 UFL1 UFL1 CGAS CGAS SHLD1 SHLD1 APLF APLF ACTR2 ACTR2 INTS3 INTS3 SMARCAD1 SMARCAD1 POLL POLL IFFO2 IFFO2 TP53BP1 TP53BP1 SHLD3 SHLD3 SHLD2 SHLD2 FAM178B FAM178B SLF1 SLF1 LOC776273 LOC776273 PNKP PNKP SETMAR SETMAR RNF168 RNF168 RNF169 RNF169 RNF138 RNF138 RIF1 RIF1 SAMHD1 SAMHD1 WDR70 WDR70 PARP3 PARP3 SLF2 SLF2 ACTR3 ACTR3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IFFO1Intermediate filament family orphan 1; Belongs to the intermediate filament family. (540 aa)
UFL1E3 UFM1-protein ligase 1; E3 UFM1-protein ligase that mediates ufmylation of target proteins; Belongs to the UFL1 family. (789 aa)
CGASCyclic GMP-AMP synthase. (294 aa)
SHLD1Shieldin complex subunit 1. (240 aa)
APLFUncharacterized protein. (531 aa)
ACTR2Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF) (By similarity). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility (By similarity). Seems to contact the pointed end of the daughter actin filament (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and r [...] (400 aa)
INTS3Integrator complex subunit 3. (1116 aa)
SMARCAD1Uncharacterized protein. (808 aa)
POLLDNA polymerase lambda. (844 aa)
IFFO2Intermediate filament family orphan 2; Belongs to the intermediate filament family. (491 aa)
TP53BP1Tumor protein p53 binding protein 1. (1907 aa)
SHLD3Shieldin complex subunit 3. (249 aa)
SHLD2Shieldin complex subunit 2. (895 aa)
FAM178BUncharacterized protein. (653 aa)
SLF1SMC5-SMC6 complex localization factor 1. (981 aa)
LOC7762731-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1303 aa)
PNKPUncharacterized protein. (206 aa)
SETMARUncharacterized protein. (297 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (605 aa)
RNF169Ring finger protein 169. (660 aa)
RNF138Ring finger protein 138. (246 aa)
RIF1Telomere-associated protein RIF1; Key regulator of TP53BP1 that plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage: acts by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs. In response to DNA damage, interacts with ATM- phosphorylated TP53BP1, allowing recruitment to DNA DSBs (By similarity). Once recruited to DSBs, RIF1 and TP53BP1 act by promoting NHEJ-mediated repair of DSBs. In the same time, RIF1 and TP53BP1 specifically counteract DSBs resection via homologous recombination (HR) during G1 phase (By similarity). (2168 aa)
SAMHD1Deoxynucleoside triphosphate triphosphohydrolase SAMHD1; Protein that acts both as a host restriction factor involved in defense response to virus and as a regulator of DNA end resection at stalled replication forks. Has deoxynucleoside triphosphate (dNTPase) activity, which is required to restrict infection by viruses: dNTPase activity reduces cellular dNTP levels to levels too low for retroviral reverse transcription to occur, blocking early-stage virus replication in dendritic and other myeloid cells. Functions during S phase at stalled DNA replication forks to promote the resection [...] (614 aa)
WDR70WD_REPEATS_REGION domain-containing protein. (644 aa)
PARP3Poly [ADP-ribose] polymerase. (526 aa)
SLF2SMC5-SMC6 complex localization factor 2. (1189 aa)
ACTR3Actin-related protein 3; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility (By similarity). Seems to contact the pointed end of the daughter actin filament (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged [...] (418 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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