STRINGSTRING
WNT3 WNT3 CASP9 CASP9 VCP VCP KLHL10 KLHL10 CUL3 CUL3 LMINA LMINA IL18 IL18 CASP8 CASP8 CASP6 CASP6 BCL2 BCL2 LMNB1 LMNB1 TXN TXN TNFRSF21 TNFRSF21 ATM ATM RHOA RHOA PANX1 PANX1 CUL1 CUL1 IL1B IL1B HTRA2 HTRA2 SEPT4 SEPT4 MCL1 MCL1 CASP18 CASP18 CASP3 CASP3 LMNA-2 LMNA-2 CASP1 CASP1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
CASP9Caspase 9; Belongs to the peptidase C14A family. (418 aa)
VCPValosin containing protein. (806 aa)
KLHL10BTB domain-containing protein. (584 aa)
CUL3Cullin 3; Belongs to the cullin family. (768 aa)
LMINAUncharacterized protein; Belongs to the intermediate filament family. (451 aa)
IL18Interleukin-18; Augments natural killer cell activity in spleen cells and stimulates interferon gamma production in T-helper type I cells. (198 aa)
CASP8Uncharacterized protein; Belongs to the peptidase C14A family. (482 aa)
CASP6Uncharacterized protein; Belongs to the peptidase C14A family. (317 aa)
BCL2Apoptosis regulator Bcl-2; Suppresses apoptosis in a variety of cell systems including factor-dependent lymphohematopoietic and neural cells. Regulates cell death by controlling the mitochondrial membrane permeability. Appears to function in a feedback loop system with caspases. Inhibits caspase activity either by preventing the release of cytochrome c from the mitochondria and/or by binding to the apoptosis-activating factor (APAF-1). (233 aa)
LMNB1Lamin-B1; Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin; Belongs to the intermediate filament family. (650 aa)
TXNThioredoxin; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). Plays a role in the reversible S-nitrosylation of cysteine residues in target proteins, and thereby contributes to the response to intracellular nitric oxide. Nitrosylates the active site Cys of CASP3 in response to nitric oxide (NO), and thereby inhibits caspase-3 activity. Induces the FOS/JUN AP-1 DNA binding activity in ionizing radiation (IR) cells through its oxidation/reduction status [...] (105 aa)
TNFRSF21Uncharacterized protein. (651 aa)
ATMNon-specific serine/threonine protein kinase. (3050 aa)
RHOAGTP-binding protein. (193 aa)
PANX1Pannexin; Structural component of the gap junctions and the hemichannels. (433 aa)
CUL1Cullin 1; Belongs to the cullin family. (776 aa)
IL1BInterleukin-1; Belongs to the IL-1 family. (267 aa)
HTRA2HtrA serine peptidase 2. (200 aa)
SEPT4Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (476 aa)
MCL1Uncharacterized protein. (335 aa)
CASP18Initiator caspase; Belongs to the peptidase C14A family. (464 aa)
CASP3Caspase-3; Belongs to the peptidase C14A family. (283 aa)
LMNA-2Lamin-B2; Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin; Belongs to the intermediate filament family. (658 aa)
CASP1Uncharacterized protein; Belongs to the peptidase C14A family. (540 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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