STRINGSTRING
BECN1 BECN1 CALR3 CALR3 VCL VCL SEC62 SEC62 SEL1L SEL1L RTN1 RTN1 NPC1 NPC1 CALR CALR CCPG1 CCPG1 CANX CANX RTN4 RTN4 FAM134A FAM134A MARCHF6 MARCHF6 ACTB ACTB GAPDH GAPDH RTN3 RTN3 FAM134C FAM134C RETREG1 RETREG1 RTN2 RTN2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BECN1Beclin-1; Plays a central role in autophagy (By similarity). Acts as core subunit of different PI3K complex forms that mediate formation of phosphatidylinositol 3-phosphate and are believed to play a role in multiple membrane trafficking pathways such as initiation of autophagosomes, maturation of autophagosomes and endocytosis (By similarity). Involved in regulation of degradative endocytic trafficking and required for the abcission step in cytokinesis, probably in the context of PI3KC3-C2 (By similarity). Belongs to the beclin family. (447 aa)
CALR3Calreticulin. (420 aa)
VCLVinculin; Actin filament (F-actin)-binding protein involved in cell- matrix adhesion and cell-cell adhesion. Regulates cell-surface E- cadherin expression and potentiates mechanosensing by the E-cadherin complex. May also play important roles in cell morphology and locomotion; Belongs to the vinculin/alpha-catenin family. (1135 aa)
SEC62Translocation protein SEC62; Required for preprotein translocation. (398 aa)
SEL1LSEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (791 aa)
RTN1Reticulon. (760 aa)
NPC1NPC intracellular cholesterol transporter 1. (1286 aa)
CALRCalreticulin. (416 aa)
CCPG1Cell cycle progression protein 1; May be involved in the regulation of Rho-mediated signaling pathways and in cell cycle regulation; Belongs to the CCPG1 family. (801 aa)
CANXUncharacterized protein. (601 aa)
RTN4Reticulon. (1159 aa)
FAM134AUncharacterized protein. (559 aa)
MARCHF6Membrane associated ring-CH-type finger 6. (921 aa)
ACTBActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
GAPDHGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...] (333 aa)
RTN3Reticulon. (320 aa)
FAM134CUncharacterized protein. (435 aa)
RETREG1Reticulophagy regulator 1. (365 aa)
RTN2Reticulon. (316 aa)
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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