9 items (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PXDN	Peroxidasin. (1611 aa)
	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...] (333 aa)
	SLC17A6	MFS domain-containing protein. (585 aa)
	GALR1	Galanin receptor; Belongs to the G-protein coupled receptor 1 family. (357 aa)
	GAL	Galanin variant 1. (141 aa)
	PXDNL	Uncharacterized protein. (1406 aa)
	CTRL	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (413 aa)
	GAD1	Glutamate decarboxylase 67. (590 aa)
	GAD2	Glutamate decarboxylase 2. (807 aa)

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTRL	GAPDH	ENSGALP00000052418	ENSGALP00000063325	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...]	0.712
CTRL	PXDN	ENSGALP00000052418	ENSGALP00000026363	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Peroxidasin.	0.405
CTRL	PXDNL	ENSGALP00000052418	ENSGALP00000049777	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.430
GAD1	GAD2	ENSGALP00000053512	ENSGALP00000054933	Glutamate decarboxylase 67.	Glutamate decarboxylase 2.	0.930
GAD1	GAL	ENSGALP00000053512	ENSGALP00000042337	Glutamate decarboxylase 67.	Galanin variant 1.	0.457
GAD1	GAPDH	ENSGALP00000053512	ENSGALP00000063325	Glutamate decarboxylase 67.	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...]	0.529
GAD1	PXDN	ENSGALP00000053512	ENSGALP00000026363	Glutamate decarboxylase 67.	Peroxidasin.	0.439
GAD1	PXDNL	ENSGALP00000053512	ENSGALP00000049777	Glutamate decarboxylase 67.	Uncharacterized protein.	0.440
GAD1	SLC17A6	ENSGALP00000053512	ENSGALP00000055805	Glutamate decarboxylase 67.	MFS domain-containing protein.	0.957
GAD2	GAD1	ENSGALP00000054933	ENSGALP00000053512	Glutamate decarboxylase 2.	Glutamate decarboxylase 67.	0.930
GAD2	SLC17A6	ENSGALP00000054933	ENSGALP00000055805	Glutamate decarboxylase 2.	MFS domain-containing protein.	0.808
GAL	GAD1	ENSGALP00000042337	ENSGALP00000053512	Galanin variant 1.	Glutamate decarboxylase 67.	0.457
GAL	GALR1	ENSGALP00000042337	ENSGALP00000041025	Galanin variant 1.	Galanin receptor; Belongs to the G-protein coupled receptor 1 family.	0.999
GAL	SLC17A6	ENSGALP00000042337	ENSGALP00000055805	Galanin variant 1.	MFS domain-containing protein.	0.538
GALR1	GAL	ENSGALP00000041025	ENSGALP00000042337	Galanin receptor; Belongs to the G-protein coupled receptor 1 family.	Galanin variant 1.	0.999
GAPDH	CTRL	ENSGALP00000063325	ENSGALP00000052418	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...]	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.712
GAPDH	GAD1	ENSGALP00000063325	ENSGALP00000053512	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...]	Glutamate decarboxylase 67.	0.529
GAPDH	PXDN	ENSGALP00000063325	ENSGALP00000026363	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...]	Peroxidasin.	0.980
GAPDH	PXDNL	ENSGALP00000063325	ENSGALP00000049777	Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...]	Uncharacterized protein.	0.980
PXDN	CTRL	ENSGALP00000026363	ENSGALP00000052418	Peroxidasin.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.405