8 items (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PNOC	Uncharacterized protein. (194 aa)
	IAPP	Amyloid protein. (135 aa)
	NPY	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family. (97 aa)
	POMC	Uncharacterized protein. (251 aa)
	RBM3	Cold-inducible RNA-binding protein. (190 aa)
	ALB	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood; Belongs to the ALB/AFP/VDB family. (565 aa)
	GAL	Galanin variant 1. (141 aa)
	NTS	Neurotensin. (164 aa)

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALB	NPY	ENSGALP00000044604	ENSGALP00000017870	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood; Belongs to the ALB/AFP/VDB family.	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	0.484
ALB	NTS	ENSGALP00000044604	ENSGALP00000040948	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood; Belongs to the ALB/AFP/VDB family.	Neurotensin.	0.404
ALB	POMC	ENSGALP00000044604	ENSGALP00000063133	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood; Belongs to the ALB/AFP/VDB family.	Uncharacterized protein.	0.579
GAL	NPY	ENSGALP00000042337	ENSGALP00000017870	Galanin variant 1.	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	0.932
GAL	NTS	ENSGALP00000042337	ENSGALP00000040948	Galanin variant 1.	Neurotensin.	0.812
GAL	PNOC	ENSGALP00000042337	ENSGALP00000026777	Galanin variant 1.	Uncharacterized protein.	0.712
GAL	POMC	ENSGALP00000042337	ENSGALP00000063133	Galanin variant 1.	Uncharacterized protein.	0.822
NPY	ALB	ENSGALP00000017870	ENSGALP00000044604	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood; Belongs to the ALB/AFP/VDB family.	0.484
NPY	GAL	ENSGALP00000017870	ENSGALP00000042337	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	Galanin variant 1.	0.932
NPY	NTS	ENSGALP00000017870	ENSGALP00000040948	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	Neurotensin.	0.753
NPY	PNOC	ENSGALP00000017870	ENSGALP00000026777	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	Uncharacterized protein.	0.816
NPY	POMC	ENSGALP00000017870	ENSGALP00000063133	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	Uncharacterized protein.	0.992
NTS	ALB	ENSGALP00000040948	ENSGALP00000044604	Neurotensin.	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood; Belongs to the ALB/AFP/VDB family.	0.404
NTS	GAL	ENSGALP00000040948	ENSGALP00000042337	Neurotensin.	Galanin variant 1.	0.812
NTS	NPY	ENSGALP00000040948	ENSGALP00000017870	Neurotensin.	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	0.753
NTS	PNOC	ENSGALP00000040948	ENSGALP00000026777	Neurotensin.	Uncharacterized protein.	0.498
NTS	POMC	ENSGALP00000040948	ENSGALP00000063133	Neurotensin.	Uncharacterized protein.	0.600
PNOC	GAL	ENSGALP00000026777	ENSGALP00000042337	Uncharacterized protein.	Galanin variant 1.	0.712
PNOC	NPY	ENSGALP00000026777	ENSGALP00000017870	Uncharacterized protein.	C-flanking peptide of NPY; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	0.816
PNOC	NTS	ENSGALP00000026777	ENSGALP00000040948	Uncharacterized protein.	Neurotensin.	0.498